Information for 13-TCGCTTTGAAAAA (Motif 25)

A C G T A G T C A T C G A G T C A C G T A C G T C G A T A C T G C G T A C G T A C G T A C G T A G T C A
Reverse Opposite:
A C G T A C G T C G A T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A T G C C T A G C G T A
p-value:1e-9
log p-value:-2.218e+01
Information Content per bp:1.887
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 19.0bp
Average Position of motif in Background61.5 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TCGCTTTGAAAAA-
----TTTGAAACCG
 A C G T A G T C A T C G A G T C A C G T A C G T C G A T A C T G C G T A C G T A C G T A C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCGCTTTGAAAAA
--CCTTTGATGT-
 A C G T A G T C A T C G A G T C A C G T A C G T C G A T A C T G C G T A C G T A C G T A C G T A G T C A
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCGCTTTGAAAAA--
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A G T C A T C G A G T C A C G T A C G T C G A T A C T G C G T A C G T A C G T A C G T A G T C A A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0083.1_Tcf7_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCGCTTTGAAAAA--
NNTTCCTTTGATCTNNA
 A C G T A C G T A C G T A G T C A T C G A G T C A C G T A C G T C G A T A C T G C G T A C G T A C G T A C G T A G T C A A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCGCTTTGAAAAA
---ATTTGAATT-
 A C G T A G T C A T C G A G T C A C G T A C G T C G A T A C T G C G T A C G T A C G T A C G T A G T C A
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCGCTTTGAAAAA--
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T A G T C A T C G A G T C A C G T A C G T C G A T A C T G C G T A C G T A C G T A C G T A G T C A A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCGCTTTGAAAAA-
TNCCTTTGATCTTN
 A C G T A G T C A T C G A G T C A C G T A C G T C G A T A C T G C G T A C G T A C G T A C G T A G T C A A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCGCTTTGAAAAA
TNCCTTTGATGT-
 A C G T A G T C A T C G A G T C A C G T A C G T C G A T A C T G C G T A C G T A C G T A C G T A G T C A
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TCGCTTTGAAAAA
-----TGGAAAA-
 A C G T A G T C A T C G A G T C A C G T A C G T C G A T A C T G C G T A C G T A C G T A C G T A G T C A
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCGCTTTGAAAAA--
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A G T C A T C G A G T C A C G T A C G T C G A T A C T G C G T A C G T A C G T A C G T A G T C A A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C