Information for 12-TTCATGTTCTTCT (Motif 9)

A C G T A C G T A G T C C G T A A C G T C T A G C G A T A C G T A G T C A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A A C T G C G T A C G T A A G T C C G T A A C G T C T A G C G T A C G T A
p-value:1e-8
log p-value:-1.941e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 27.4bp
Average Position of motif in Background59.5 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TTCATGTTCTTCT
-------GCTTCC
 A C G T A C G T A G T C C G T A A C G T C T A G C G A T A C G T A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PB0141.1_Isgf3g_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTCATGTTCTTCT
NNGTANTGTTTTNC-
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C T A G C G A T A C G T A G T C A C G T A C G T A G T C A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTCATGTTCTTCT
AAGATATCCTT--
 A C G T A C G T A G T C C G T A A C G T C T A G C G A T A C G T A G T C A C G T A C G T A G T C A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TTCATGTTCTTCT
AAAATACATGTAATACT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C T A G C G A T A C G T A G T C A C G T A C G T A G T C A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0087.1_Irx6/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TTCATGTTCTTCT
AAAATACATGTAAAAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C T A G C G A T A C G T A G T C A C G T A C G T A G T C A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTCATGTTCTTCT---
-NNNTGTTGTTGTTNG
 A C G T A C G T A G T C C G T A A C G T C T A G C G A T A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PH0116.1_Nkx2-9/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TTCATGTTCTTCT--
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C T A G C G A T A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TTCATGTTCTTCT
ACATTCATGACACG--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C T A G C G A T A C G T A G T C A C G T A C G T A G T C A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TTCATGTTCTTCT
NNAATTAATGACCNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C T A G C G A T A C G T A G T C A C G T A C G T A G T C A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TTCATGTTCTTCT
AATATACATGTAATATA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C T A G C G A T A C G T A G T C A C G T A C G T A G T C A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T