Information for 3-TAGGTGGCAG (Motif 2)

G A C T T G C A C A T G T C A G C A G T C T A G C A T G A G T C C G T A T A C G
Reverse Opposite:
A T G C A C G T T C A G G T A C G A T C G T C A A G T C G T A C A C G T C T G A
p-value:1e-39
log p-value:-9.021e+01
Information Content per bp:1.680
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif9.53%
Number of Background Sequences with motif653.0
Percentage of Background Sequences with motif1.35%
Average Position of motif in Targets50.5 +/- 22.5bp
Average Position of motif in Background50.1 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:TAGGTGGCAG
-AGGTGTCA-
 G A C T T G C A C A T G T C A G C A G T C T A G C A T G A G T C C G T A T A C G
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TAGGTGGCAG
-ARNTGACA-
 G A C T T G C A C A T G T C A G C A G T C T A G C A T G A G T C C G T A T A C G
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TAGGTGGCAG----
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T G A C T T G C A C A T G T C A G C A G T C T A G C A T G A G T C C G T A T A C G A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TAGGTGGCAG
-GGTTGGCAT
 G A C T T G C A C A T G T C A G C A G T C T A G C A T G A G T C C G T A T A C G
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TAGGTGGCAG-
-AGGTGTGAAM
 G A C T T G C A C A T G T C A G C A G T C T A G C A T G A G T C C G T A T A C G A C G T
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TAGGTGGCAG--
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C G T G A C T T G C A C A T G T C A G C A G T C T A G C A T G A G T C C G T A T A C G A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TAGGTGGCAG--
--VBTGWCAGCB
 G A C T T G C A C A T G T C A G C A G T C T A G C A T G A G T C C G T A T A C G A C G T A C G T
A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TAGGTGGCAG
-AGGTGTGA-
 G A C T T G C A C A T G T C A G C A G T C T A G C A T G A G T C C G T A T A C G
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TAGGTGGCAG
-AGGTGTGA-
 G A C T T G C A C A T G T C A G C A G T C T A G C A T G A G T C C G T A T A C G
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TAGGTGGCAG----
-AGGTGNCAGACAG
 G A C T T G C A C A T G T C A G C A G T C T A G C A T G A G T C C G T A T A C G A C G T A C G T A C G T A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G