Information for 24-GCCCGATACTCAC (Motif 51)

A C T G A G T C A G T C A G T C A C T G C G T A A C G T C G T A A G T C A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C G T A G T C A C T G A C T G A C T G A G T C
p-value:1e-6
log p-value:-1.447e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.3 +/- 35.1bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCCCGATACTCAC
GSCTGTCACTCA-
 A C T G A G T C A G T C A G T C A C T G C G T A A C G T C G T A A G T C A C G T A G T C C G T A A G T C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCCGATACTCAC--
CTGATCGAAACCAAAGT
 A C G T A C G T A C T G A G T C A G T C A G T C A C T G C G T A A C G T C G T A A G T C A C G T A G T C C G T A A G T C A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GCCCGATACTCAC---
-----NNACTTACCTN
 A C T G A G T C A G T C A G T C A C T G C G T A A C G T C G T A A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCCCGATACTCAC---
GNNAGCTAATCCCCCN
 A C T G A G T C A G T C A G T C A C T G C G T A A C G T C G T A A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GCCCGATACTCAC
ATAAACCGAAACCAA-
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C T G C G T A A C G T C G T A A G T C A C G T A G T C C G T A A G T C
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCCCGATACTCAC--
TGACCTNTAGTAACCC
 A C G T A C T G A G T C A G T C A G T C A C T G C G T A A C G T C G T A A G T C A C G T A G T C C G T A A G T C A C G T A C G T
G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

PH0023.1_Dlx4/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GCCCGATACTCAC----
GCGCTATAATTACCGAC
 A C T G A G T C A G T C A G T C A C T G C G T A A C G T C G T A A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GCCCGATACTCAC
-SCTGTCAVTCAV
 A C T G A G T C A G T C A G T C A C T G C G T A A C G T C G T A A G T C A C G T A G T C C G T A A G T C
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GCCCGATACTCAC
-NCTGTCAATCAN
 A C T G A G T C A G T C A G T C A C T G C G T A A C G T C G T A A G T C A C G T A G T C C G T A A G T C
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PH0022.1_Dlx3/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GCCCGATACTCAC----
TCGCGATAATTACCGAC
 A C T G A G T C A G T C A G T C A C T G C G T A A C G T C G T A A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C