Information for 7-CCGTGTTCAA (Motif 44)

A G T C A G T C A T C G A C G T A C T G A G C T A C G T G T A C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G G T C A C T G A A G T C C G T A A T G C A C T G A C T G
p-value:1e-7
log p-value:-1.626e+01
Information Content per bp:1.870
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.6 +/- 18.6bp
Average Position of motif in Background67.3 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CCGTGTTCAA---
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A G T C A G T C A T C G A C G T A C T G A G C T A C G T G T A C C G T A C G T A A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

MTF1/MA0863.1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CCGTGTTCAA-
GTGCCGTGTGCAAA
 A C G T A C G T A C G T A G T C A G T C A T C G A C G T A C T G A G C T A C G T G T A C C G T A C G T A A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCGTGTTCAA---
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A G T C A G T C A T C G A C G T A C T G A G C T A C G T G T A C C G T A C G T A A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCGTGTTCAA-
-ATTGCGCAAC
 A G T C A G T C A T C G A C G T A C T G A G C T A C G T G T A C C G T A C G T A A C G T
A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCGTGTTCAA-
-CSTGGGAAAD
 A G T C A G T C A T C G A C G T A C T G A G C T A C G T G T A C C G T A C G T A A C G T
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCGTGTTCAA
GGACGTGC----
 A C G T A C G T A G T C A G T C A T C G A C G T A C T G A G C T A C G T G T A C C G T A C G T A
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCGTGTTCAA----
ACCGTGACTAATTNN
 A C G T A G T C A G T C A T C G A C G T A C T G A G C T A C G T G T A C C G T A C G T A A C G T A C G T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCGTGTTCAA--
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A C G T A G T C A G T C A T C G A C G T A C T G A G C T A C G T G T A C C G T A C G T A A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCGTGTTCAA----
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A G T C A G T C A T C G A C G T A C T G A G C T A C G T G T A C C G T A C G T A A C G T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCGTGTTCAA
RTACGTGC----
 A C G T A C G T A G T C A G T C A T C G A C G T A C T G A G C T A C G T G T A C C G T A C G T A
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T