Information for 19-AGTCAAGTTGACT (Motif 43)

C G T A C T A G C G A T A T G C G C T A C G T A A C T G C A G T A C G T T C A G C G T A A T G C A C G T
Reverse Opposite:
C G T A A T C G A C G T A G T C G T C A G T C A G T A C G A C T C A G T T A C G C G T A A G T C G C A T
p-value:1e-7
log p-value:-1.626e+01
Information Content per bp:1.713
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif14.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.0 +/- 24.6bp
Average Position of motif in Background52.7 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:AGTCAAGTTGACT---
-------TTGACTTTT
 C G T A C T A G C G A T A T G C G C T A C G T A A C T G C A G T A C G T T C A G C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGTCAAGTTGACT--
GGTCANNGTGACCTN
 C G T A C T A G C G A T A T G C G C T A C G T A A C T G C A G T A C G T T C A G C G T A A T G C A C G T A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGTCAAGTTGACT
--TCAAGGTCAN-
 C G T A C T A G C G A T A T G C G C T A C G T A A C T G C A G T A C G T T C A G C G T A A T G C A C G T
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGTCAAGTTGACT
--TCAAGGTCATA
 C G T A C T A G C G A T A T G C G C T A C G T A A C T G C A G T A C G T T C A G C G T A A T G C A C G T
A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

PB0081.1_Tcf1_1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGTCAAGTTGACT-----
-ACTTAGTTAACTAAAAA
 C G T A C T A G C G A T A T G C G C T A C G T A A C T G C A G T A C G T T C A G C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGTCAAGTTGACT-
AATTTCAAGTGGCTTN
 A C G T A C G T C G T A C T A G C G A T A T G C G C T A C G T A A C T G C A G T A C G T T C A G C G T A A T G C A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGTCAAGTTGACT
-BTCAAGGTCA--
 C G T A C T A G C G A T A T G C G C T A C G T A A C T G C A G T A C G T T C A G C G T A A T G C A C G T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGTCAAGTTGACT--
AAGGTCACGGTGACCTG
 A C G T A C G T C G T A C T A G C G A T A T G C G C T A C G T A A C T G C A G T A C G T T C A G C G T A A T G C A C G T A C G T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGTCAAGTTGACT
--TCAAGGTCAT-
 C G T A C T A G C G A T A T G C G C T A C G T A A C T G C A G T A C G T T C A G C G T A A T G C A C G T
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGTCAAGTTGACT
AGGTCAAGGTCA--
 A C G T C G T A C T A G C G A T A T G C G C T A C G T A A C T G C A G T A C G T T C A G C G T A A T G C A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T