Information for 6-TAAYBATGCT (Motif 41)

A C G T C G T A C G T A G A T C A C G T C G T A C G A T C T A G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A C G T T G A C C T A G A C G T C G A T C G T A
p-value:1e-7
log p-value:-1.718e+01
Information Content per bp:1.813
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif117.0
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets56.8 +/- 29.5bp
Average Position of motif in Background51.9 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EVX2/MA0888.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TAAYBATGCT
NNTAATTANN--
 A C G T A C G T A C G T C G T A C G T A G A T C A C G T C G T A C G A T C T A G A G T C A C G T
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TAAYBATGCT-
NNNGTAACTANGNNA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G A T C A C G T C G T A C G A T C T A G A G T C A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

POU4F2/MA0683.1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TAAYBATGCT-
CTCATTAATTATGCAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G A T C A C G T C G T A C G A T C T A G A G T C A C G T A C G T
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

EVX1/MA0887.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAAYBATGCT
GNTAATTANN--
 A C G T A C G T A C G T C G T A C G T A G A T C A C G T C G T A C G A T C T A G A G T C A C G T
A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C A C G T A C G T

HOXB2/MA0902.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAAYBATGCT
NNTAATTANN--
 A C G T A C G T A C G T C G T A C G T A G A T C A C G T C G T A C G A T C T A G A G T C A C G T
A C T G A G C T C G A T C T G A C G T A A G C T A C G T C T G A A T G C A G C T A C G T A C G T

VAX1/MA0722.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAAYBATGCT
CTAATTAC---
 A C G T A C G T C G T A C G T A G A T C A C G T C G T A C G A T C T A G A G T C A C G T
A G T C G A C T G T C A G T C A C G A T C A G T C T G A G A T C A C G T A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TAAYBATGCT-
NNCTNAATTATGANN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G A T C A C G T C G T A C G A T C T A G A G T C A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

HOXA2/MA0900.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TAAYBATGCT
GNTAATTANN--
 A C G T A C G T A C G T C G T A C G T A G A T C A C G T C G T A C G A T C T A G A G T C A C G T
A T C G A T C G C G A T C T G A G T C A A G C T A C G T C T G A A T C G A T C G A C G T A C G T

PH0072.1_Hoxc8/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------TAAYBATGCT
TTGGGGTAATTAACGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G A T C A C G T C G T A C G A T C T A G A G T C A C G T
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TAAYBATGCT
TTAATTAN---
 A C G T A C G T C G T A C G T A G A T C A C G T C G T A C G A T C T A G A G T C A C G T
C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T A C G T A C G T