Information for 17-CCAGCATGGAAAA (Motif 40)

A G T C A G T C C G T A A C T G A G T C C G T A A C G T C T A G A C T G C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G A T A G T C A G T C G T C A A C G T A C T G A G T C A C G T C T A G A C T G
p-value:1e-7
log p-value:-1.732e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets85.2 +/- 6.3bp
Average Position of motif in Background55.1 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT5/MA0606.1/Jaspar

Match Rank:1
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:CCAGCATGGAAAA-
----NATGGAAAAN
 A G T C A G T C C G T A A C T G A G T C C G T A A C G T C T A G A C T G C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.71
Offset:6
Orientation:reverse strand
Alignment:CCAGCATGGAAAA
------TGGAAAA
 A G T C A G T C C G T A A C T G A G T C C G T A A C G T C T A G A C T G C G T A C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CCAGCATGGAAAA-
----AATGGAAAAT
 A G T C A G T C C G T A A C T G A G T C C G T A A C G T C T A G A C T G C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CCAGCATGGAAAA-
----AATGGAAAAT
 A G T C A G T C C G T A A C T G A G T C C G T A A C G T C T A G A C T G C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CCAGCATGGAAAA-
----NNTGGAAANN
 A G T C A G T C C G T A A C T G A G T C C G T A A C G T C T A G A C T G C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCAGCATGGAAAA
CCACACAGCAGGAGA--
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A G T C C G T A A C G T C T A G A C T G C G T A C G T A C G T A C G T A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCATGGAAAA
DCTCAGCAGG-----
 A C G T A C G T A G T C A G T C C G T A A C T G A G T C C G T A A C G T C T A G A C T G C G T A C G T A C G T A C G T A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCAGCATGGAAAA-
----CSTGGGAAAD
 A G T C A G T C C G T A A C T G A G T C C G T A A C G T C T A G A C T G C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCAGCATGGAAAA
CACAGCAGGGGG--
 A C G T A G T C A G T C C G T A A C T G A G T C C G T A A C G T C T A G A C T G C G T A C G T A C G T A C G T A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCAGCATGGAAAA
CCACACAGCAGGAGA--
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A G T C C G T A A C G T C T A G A C T G C G T A C G T A C G T A C G T A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T