Information for 3-SAAAAAAGAAKATTCT (Motif 4)

A T G C C G T A C G T A C G T A C G T A C G T A C T G A C T A G G T C A C G T A A C T G C G T A C G A T C A G T A T G C A C G T
Reverse Opposite:
T C G A A T C G G T C A C G T A G A C T G T A C A C G T A C G T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A T C G
p-value:1e-12
log p-value:-2.779e+01
Information Content per bp:1.776
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.7 +/- 18.3bp
Average Position of motif in Background28.7 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----SAAAAAAGAAKATTCT
TACTGGAAAAAAAA-------
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A C G T A C G T A C T G A C T A G G T C A C G T A A C T G C G T A C G A T C A G T A T G C A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----SAAAAAAGAAKATTCT
GTTAAAAAAAAAAATTA---
 A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A C G T A C G T A C T G A C T A G G T C A C G T A A C T G C G T A C G A T C A G T A T G C A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--SAAAAAAGAAKATTCT
AACAAACAACAAGAG---
 A C G T A C G T A T G C C G T A C G T A C G T A C G T A C G T A C T G A C T A G G T C A C G T A A C T G C G T A C G A T C A G T A T G C A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----SAAAAAAGAAKATTCT
GTTCAAAAAAAAAATTC---
 A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A C G T A C G T A C T G A C T A G G T C A C G T A A C T G C G T A C G A T C A G T A T G C A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----SAAAAAAGAAKATTCT
ATAAGAACAAAGGACTA---
 A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A C G T A C G T A C T G A C T A G G T C A C G T A A C T G C G T A C G A T C A G T A T G C A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----SAAAAAAGAAKATTCT
AGAAGAACAAAGGACTA---
 A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A C G T A C G T A C T G A C T A G G T C A C G T A A C T G C G T A C G A T C A G T A T G C A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:SAAAAAAGAAKATTCT
-AGAAACGAAAGT---
 A T G C C G T A C G T A C G T A C G T A C G T A C T G A C T A G G T C A C G T A A C T G C G T A C G A T C A G T A T G C A C G T
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----SAAAAAAGAAKATTCT
AGCCGAAAAAAAAAT-----
 A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A C G T A C G T A C T G A C T A G G T C A C G T A A C T G C G T A C G A T C A G T A T G C A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----SAAAAAAGAAKATTCT
AAACAGACAAAGGAAT-----
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A C G T A C G T A C T G A C T A G G T C A C G T A A C T G C G T A C G A T C A G T A T G C A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:SAAAAAAGAAKATTCT
---AAACAAACATTC-
 A T G C C G T A C G T A C G T A C G T A C G T A C T G A C T A G G T C A C G T A A C T G C G T A C G A T C A G T A T G C A C G T
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T