Information for 15-YTYCWGTCTRCCYGCA (Motif 32)

A G T C A C G T G A C T A G T C C G T A A C T G A C G T A T G C A C G T C T A G A G T C A G T C A G C T A T C G A G T C C G T A
Reverse Opposite:
A C G T C T A G A T G C C T G A A C T G A C T G A G T C C G T A A T C G C G T A A G T C C G A T A C T G C T G A C G T A C T A G
p-value:1e-8
log p-value:-2.008e+01
Information Content per bp:1.863
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.8 +/- 7.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:YTYCWGTCTRCCYGCA--
--------TACCCGCATN
 A G T C A C G T G A C T A G T C C G T A A C T G A C G T A T G C A C G T C T A G A G T C A G T C A G C T A T C G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

GCM1/MA0646.1/Jaspar

Match Rank:2
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:YTYCWGTCTRCCYGCA--
-------GTACCCGCATN
 A G T C A C G T G A C T A G T C C G T A A C T G A C G T A T G C A C G T C T A G A G T C A G T C A G C T A T C G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.59
Offset:7
Orientation:forward strand
Alignment:YTYCWGTCTRCCYGCA
-------CTGCCCGCA
 A G T C A C G T G A C T A G T C C G T A A C T G A C G T A T G C A C G T C T A G A G T C A G T C A G C T A T C G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:YTYCWGTCTRCCYGCA
---CTGTCTGG-----
 A G T C A C G T G A C T A G T C C G T A A C T G A C G T A T G C A C G T C T A G A G T C A G T C A G C T A T C G A G T C C G T A
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:YTYCWGTCTRCCYGCA
---TWGTCTGV-----
 A G T C A C G T G A C T A G T C C G T A A C T G A C G T A T G C A C G T C T A G A G T C A G T C A G C T A T C G A G T C C G T A
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:YTYCWGTCTRCCYGCA
-VBSYGTCTGG-----
 A G T C A C G T G A C T A G T C C G T A A C T G A C G T A T G C A C G T C T A G A G T C A G T C A G C T A T C G A G T C C G T A
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:YTYCWGTCTRCCYGCA-----
-----TCGTACCCGCATCATT
 A G T C A C G T G A C T A G T C C G T A A C T G A C G T A T G C A C G T C T A G A G T C A G T C A G C T A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:YTYCWGTCTRCCYGCA
---CTGTCTGTCACCT
 A G T C A C G T G A C T A G T C C G T A A C T G A C G T A T G C A C G T C T A G A G T C A G T C A G C T A T C G A G T C C G T A
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:YTYCWGTCTRCCYGCA
----TGTCTGDCACCT
 A G T C A C G T G A C T A G T C C G T A A C T G A C G T A T G C A C G T C T A G A G T C A G T C A G C T A T C G A G T C C G T A
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:YTYCWGTCTRCCYGCA
-----RYHYACCTGB-
 A G T C A C G T G A C T A G T C C G T A A C T G A C G T A T G C A C G T C T A G A G T C A G T C A G C T A T C G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T