Information for 4-AGACCTTGAA (Motif 29)

C G T A A C T G C G T A G A T C A G T C C G A T A C G T A C T G C G T A G T C A
Reverse Opposite:
A C G T C G A T A G T C C G T A C G T A A C T G C T A G A C G T A G T C C G A T
p-value:1e-9
log p-value:-2.189e+01
Information Content per bp:1.867
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif199.6
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets48.6 +/- 27.4bp
Average Position of motif in Background49.2 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-AGACCTTGAA
ATGACCTTGAA
 A C G T C G T A A C T G C G T A G A T C A G T C C G A T A C G T A C T G C G T A G T C A
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:AGACCTTGAA
TGACCTTGAN
 C G T A A C T G C G T A G A T C A G T C C G A T A C G T A C T G C G T A G T C A
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:AGACCTTGAA
TGACCTTGAV
 C G T A A C T G C G T A G A T C A G T C C G A T A C G T A C T G C G T A G T C A
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--AGACCTTGAA
NATGACCTTGA-
 A C G T A C G T C G T A A C T G C G T A G A T C A G T C C G A T A C G T A C T G C G T A G T C A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--AGACCTTGAA---
GCTGACCTTGAACTN
 A C G T A C G T C G T A A C T G C G T A G A T C A G T C C G A T A C G T A C T G C G T A G T C A A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----AGACCTTGAA--
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A G A T C A G T C C G A T A C G T A C T G C G T A G T C A A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AGACCTTGAA
ATGACCTTGA-
 A C G T C G T A A C T G C G T A G A T C A G T C C G A T A C G T A C T G C G T A G T C A
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AGACCTTGAA
NTGACCTTGA-
 A C G T C G T A A C T G C G T A G A T C A G T C C G A T A C G T A C T G C G T A G T C A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AGACCTTGAA--
TGACCTTGACCT
 C G T A A C T G C G T A G A T C A G T C C G A T A C G T A C T G C G T A G T C A A C G T A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AGACCTTGAA--
TGACCTTGACCT
 C G T A A C T G C G T A G A T C A G T C C G A T A C G T A C T G C G T A G T C A A C G T A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T