Information for 12-MAWRTACTRRRGTWCA (Motif 26)

T G A C C G T A C G T A C T A G A C G T G T C A A G T C A C G T C T G A C T G A C T G A A C T G A C G T C G A T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A G T A C A G C T A G C T G A C T C G T A A C T G A C G T C G T A G A C T C G A T A C G T A C T G
p-value:1e-9
log p-value:-2.246e+01
Information Content per bp:1.815
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 22.0bp
Average Position of motif in Background41.0 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--MAWRTACTRRRGTWCA--
AGTAAACAAAAAAGAACANN
 A C G T A C G T T G A C C G T A C G T A C T A G A C G T G T C A A G T C A C G T C T G A C T G A C T G A A C T G A C G T C G A T A G T C C G T A A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---MAWRTACTRRRGTWCA
TACTAAGTACTTAAATG--
 A C G T A C G T A C G T T G A C C G T A C G T A C T A G A C G T G T C A A G T C A C G T C T G A C T G A C T G A A C T G A C G T C G A T A G T C C G T A
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G A C G T A C G T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---MAWRTACTRRRGTWCA
NNGAGGTTACTNNAGGTCA
 A C G T A C G T A C G T T G A C C G T A C G T A C T A G A C G T G T C A A G T C A C G T C T G A C T G A C T G A A C T G A C G T C G A T A G T C C G T A
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A

PH0116.1_Nkx2-9/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---MAWRTACTRRRGTWCA
TTTTAAGTACTTAAATT--
 A C G T A C G T A C G T T G A C C G T A C G T A C T A G A C G T G T C A A G T C A C G T C T G A C T G A C T G A A C T G A C G T C G A T A G T C C G T A
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:MAWRTACTRRRGTWCA----
----GGCAAAAGTCCAATAA
 T G A C C G T A C G T A C T A G A C G T G T C A A G T C A C G T C T G A C T G A C T G A A C T G A C G T C G A T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PH0112.1_Nkx2-3/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---MAWRTACTRRRGTWCA
CNTTAAGTACTTAANG---
 A C G T A C G T A C G T T G A C C G T A C G T A C T A G A C G T G T C A A G T C A C G T C T G A C T G A C T G A A C T G A C G T C G A T A G T C C G T A
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---MAWRTACTRRRGTWCA
TTCNAAGTACTTNNNNN--
 A C G T A C G T A C G T T G A C C G T A C G T A C T A G A C G T G T C A A G T C A C G T C T G A C T G A C T G A A C T G A C G T C G A T A G T C C G T A
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:MAWRTACTRRRGTWCA
-AAGCACTTAA-----
 T G A C C G T A C G T A C T A G A C G T G T C A A G T C A C G T C T G A C T G A C T G A A C T G A C G T C G A T A G T C C G T A
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:MAWRTACTRRRGTWCA
GGGTTACTANAGGTCA
 T G A C C G T A C G T A C T A G A C G T G T C A A G T C A C G T C T G A C T G A C T G A A C T G A C G T C G A T A G T C C G T A
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-MAWRTACTRRRGTWCA
AAACATAATGAGGTTGC
 A C G T T G A C C G T A C G T A C T A G A C G T G T C A A G T C A C G T C T G A C T G A C T G A A C T G A C G T C G A T A G T C C G T A
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C