Information for 11-TAACTGAATACTC (Motif 23)

A C G T C G T A G T C A G T A C A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G G T C A C T A G A C G T C G T A A C G T A C G T G T A C C G T A A C T G A C G T G A C T C G T A
p-value:1e-9
log p-value:-2.246e+01
Information Content per bp:1.842
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.6 +/- 21.0bp
Average Position of motif in Background22.1 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TAACTGAATACTC
---ATGAATATTC
 A C G T C G T A G T C A G T A C A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T A G T C
A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TAACTGAATACTC
---ATGMATATDC
 A C G T C G T A G T C A G T A C A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T A G T C
A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TAACTGAATACTC-----
---ATGAATATTCATGAG
 A C G T C G T A G T C A G T A C A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TAACTGAATACTC
ACTATGAATGAATGAT-
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A G T A C A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T A G T C
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TAACTGAATACTC
NNTNTCATGAATGT--
 A C G T A C G T A C G T A C G T C G T A G T C A G T A C A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T A G T C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TAACTGAATACTC--
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T C G T A G T C A G T A C A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T A G T C A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TAACTGAATACTC
TAATTGATTA---
 A C G T C G T A G T C A G T A C A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T A G T C
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T A C G T

PH0153.1_Prop1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TAACTGAATACTC
CGAATTAATTAAGAAAC
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A G T A C A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T A G T C
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C

Arid3b/MA0601.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAACTGAATACTC
NTAATTAATAT--
 A C G T C G T A G T C A G T A C A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T A G T C
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TAACTGAATACTC
TATGTAAATAT--
 A C G T C G T A G T C A G T A C A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T A G T C
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T