Information for 1-CGATTCTGAD (Motif 13)

A G T C C A T G G C T A A G C T A C G T A T G C A G C T A C T G G T C A C A G T
Reverse Opposite:
G T C A A C G T A G T C C T G A A T C G G T C A C T G A C G A T G T A C A C T G
p-value:1e-10
log p-value:-2.477e+01
Information Content per bp:1.736
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif37.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets59.6 +/- 15.8bp
Average Position of motif in Background43.9 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGATTCTGAD
CTATTTTTGG
 A G T C C A T G G C T A A G C T A C G T A T G C A G C T A C T G G T C A C A G T
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

POL002.1_INR/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGATTCTGAD
-NNNANTGA-
 A G T C C A T G G C T A A G C T A C G T A T G C A G C T A C T G G T C A C A G T
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGATTCTGAD-
NNCTNAATTATGANN
 A C G T A C G T A C G T A C G T A G T C C A T G G C T A A G C T A C G T A T G C A G C T A C T G G T C A C A G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CGATTCTGAD--
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A G T C C A T G G C T A A G C T A C G T A T G C A G C T A C T G G T C A C A G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGATTCTGAD---
TTCTATTTTTAGNNN
 A C G T A C G T A G T C C A T G G C T A A G C T A C G T A T G C A G C T A C T G G T C A C A G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGATTCTGAD---
---TGCTGACTCA
 A G T C C A T G G C T A A G C T A C G T A T G C A G C T A C T G G T C A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CGATTCTGAD--
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A C G T A C G T A G T C C A T G G C T A A G C T A C G T A T G C A G C T A C T G G T C A C A G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGATTCTGAD-
KCTATTTTTRGH
 A C G T A G T C C A T G G C T A A G C T A C G T A T G C A G C T A C T G G T C A C A G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGATTCTGAD-
GCTATTTTTAGC
 A C G T A G T C C A T G G C T A A G C T A C G T A T G C A G C T A C T G G T C A C A G T A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2B/MA0660.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGATTCTGAD-
GCTATTTATAGC
 A C G T A G T C C A T G G C T A A G C T A C G T A T G C A G C T A C T G G T C A C A G T A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C