Information for 5-AGAAMTRCTHADT (Motif 12)

C G T A C T A G C G T A G T C A G T C A C G A T C T G A A G T C A G C T G T C A C G T A C A G T A C G T
Reverse Opposite:
C G T A G T C A C G A T C A G T C T G A C T A G G A C T G C T A C A G T C A G T C G A T A G T C C G A T
p-value:1e-10
log p-value:-2.485e+01
Information Content per bp:1.645
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.56%
Number of Background Sequences with motif539.8
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets54.3 +/- 27.3bp
Average Position of motif in Background49.9 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0042.1_Mafk_1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAAMTRCTHADT-
TAAAAATGCTGACTT
 A C G T C G T A C T A G C G T A G T C A G T C A C G A T C T G A A G T C A G C T G T C A C G T A C A G T A C G T A C G T
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

MAFF/MA0495.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGAAMTRCTHADT----
NAAAANTGCTGACTCAGC
 A C G T C G T A C T A G C G T A G T C A G T C A C G A T C T G A A G T C A G C T G T C A C G T A C A G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C

PH0034.1_Gbx2/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGAAMTRCTHADT------
--AANCGCTAATTAGCNNN
 C G T A C T A G C G T A G T C A G T C A C G A T C T G A A G T C A G C T G T C A C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A T G C A G A C T A T G C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C A C T G A T G C G C A T

MAF::NFE2/MA0501.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGAAMTRCTHADT---
-AAANTGCTGAGTCAT
 C G T A C T A G C G T A G T C A G T C A C G A T C T G A A G T C A G C T G T C A C G T A C A G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A G C T A G A C T G A C T T A C G G T A C G C A T C A T G G C T A T A C G A C G T G T A C C G T A A G C T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGAAMTRCTHADT--
AAAWWTGCTGACWWD
 C G T A C T A G C G T A G T C A G T C A C G A T C T G A A G T C A G C T G T C A C G T A C A G T A C G T A C G T A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

LHX2/MA0700.1/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AGAAMTRCTHADT---
------ACTAATTAAC
 C G T A C T A G C G T A G T C A G T C A C G A T C T G A A G T C A G C T G T C A C G T A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C G A C T G T C A C T G A A C G T A C G T C T G A C T G A A T G C

PH0089.1_Isx/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGAAMTRCTHADT------
---ACTCCTAATTAGTCGT
 C G T A C T A G C G T A G T C A G T C A C G A T C T G A A G T C A G C T G T C A C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AGAAMTRCTHADT-
------NCTAATTA
 C G T A C T A G C G T A G T C A G T C A C G A T C T G A A G T C A G C T G T C A C G T A C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGAAMTRCTHADT---
-AAANTGCTGACTNAG
 C G T A C T A G C G T A G T C A G T C A C G A T C T G A A G T C A G C T G T C A C G T A C A G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAAMTRCTHADT---
-AWWNTGCTGAGTCAT
 C G T A C T A G C G T A G T C A G T C A C G A T C T G A A G T C A G C T G T C A C G T A C A G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A G C A T G C A T T A C G G T A C G A C T A C T G C G T A A T C G A C G T G T A C C G T A A G C T