Information for 7-RCCWTCAAARGCM (Motif 5)

T C G A G T A C A G T C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A C T G A G T C G T C A
Reverse Opposite:
A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C T G A G C T
p-value:1e-11
log p-value:-2.673e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.8 +/- 30.0bp
Average Position of motif in Background29.1 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:RCCWTCAAARGCM
-ACWTCAAAGG--
 T C G A G T A C A G T C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A C T G A G T C G T C A
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-RCCWTCAAARGCM
AAAGATCAAAGGAA
 A C G T T C G A G T A C A G T C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A C T G A G T C G T C A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:RCCWTCAAARGCM
-ACATCAAAGGNA
 T C G A G T A C A G T C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A C T G A G T C G T C A
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:RCCWTCAAARGCM
-ACATCAAAGG--
 T C G A G T A C A G T C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A C T G A G T C G T C A
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--RCCWTCAAARGCM--
TATAGATCAAAGGAAAA
 A C G T A C G T T C G A G T A C A G T C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A C T G A G T C G T C A A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--RCCWTCAAARGCM--
TATAGATCAAAGGAAAA
 A C G T A C G T T C G A G T A C A G T C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A C T G A G T C G T C A A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--RCCWTCAAARGCM--
NNNAGATCAAAGGANNN
 A C G T A C G T T C G A G T A C A G T C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A C T G A G T C G T C A A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--RCCWTCAAARGCM--
NANAGATCAAAGGGNNN
 A C G T A C G T T C G A G T A C A G T C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A C T G A G T C G T C A A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Tcf7/MA0769.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-RCCWTCAAARGCM
AAAGATCAAAGG--
 A C G T T C G A G T A C A G T C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A C T G A G T C G T C A
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-RCCWTCAAARGCM
GNCTATAAAAGG--
 A C G T T C G A G T A C A G T C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A C T G A G T C G T C A
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T