Information for 4-TTGAAATTCC (Motif 3)

G C A T C G A T A C T G G C T A C G T A C G T A G A C T A C G T A T G C A G T C
Reverse Opposite:
A C T G T A C G G T C A C T G A A C G T C G A T C A G T A G T C C G T A C G T A
p-value:1e-12
log p-value:-2.845e+01
Information Content per bp:1.854
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif71.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets51.5 +/- 30.9bp
Average Position of motif in Background48.1 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TTGAAATTCC-
-GGAAATTCCC
 G C A T C G A T A C T G G C T A C G T A C G T A G A C T A C G T A T G C A G T C A C G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TTGAAATTCC-
-GGAAATTCCC
 G C A T C G A T A C T G G C T A C G T A C G T A G A C T A C G T A T G C A G T C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TTGAAATTCC-
TTGAATGAAATTCGA
 A C G T A C G T A C G T A C G T G C A T C G A T A C T G G C T A C G T A C G T A G A C T A C G T A T G C A G T C A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TTGAAATTCC---
---GCATTCCAGN
 G C A T C G A T A C T G G C T A C G T A C G T A G A C T A C G T A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TTGAAATTCC
AGATGCAATCCC
 A C G T A C G T G C A T C G A T A C T G G C T A C G T A C G T A G A C T A C G T A T G C A G T C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTGAAATTCC--
--CACATTCCAT
 G C A T C G A T A C T G G C T A C G T A C G T A G A C T A C G T A T G C A G T C A C G T A C G T
A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TTGAAATTCC---
---RCATTCCWGG
 G C A T C G A T A C T G G C T A C G T A C G T A G A C T A C G T A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

PB0115.1_Ehf_2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTGAAATTCC------
TAGTATTTCCGATCTT
 G C A T C G A T A C T G G C T A C G T A C G T A G A C T A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T

TEAD3/MA0808.1/Jaspar

Match Rank:9
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TTGAAATTCC-
---ACATTCCA
 G C A T C G A T A C T G G C T A C G T A C G T A G A C T A C G T A T G C A G T C A C G T
A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGAAATTCC
TTTGAAACCG-
 A C G T G C A T C G A T A C T G G C T A C G T A C G T A G A C T A C G T A T G C A G T C
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T