Information for 3-TCYCACAGCYASRGGG (Motif 2)

C G A T G T A C G A T C T G A C T C G A G A T C C G T A A C T G A G T C A G T C C G T A A T C G C T G A A C T G A C T G A C T G
Reverse Opposite:
A G T C G T A C A G T C A G C T A T G C A C G T C T A G A C T G G T A C A C G T C A T G A C G T A C T G C T A G A C T G C G T A
p-value:1e-17
log p-value:-3.939e+01
Information Content per bp:1.794
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 20.3bp
Average Position of motif in Background60.2 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TCYCACAGCYASRGGG--
------TGCCCNGGGGCA
 C G A T G T A C G A T C T G A C T C G A G A T C C G T A A C T G A G T C A G T C C G T A A T C G C T G A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:TCYCACAGCYASRGGG---
-------GCCTCAGGGCAT
 C G A T G T A C G A T C T G A C T C G A G A T C C G T A A C T G A G T C A G T C C G T A A T C G C T G A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TCYCACAGCYASRGGG---
-------SCCTSAGGSCAW
 C G A T G T A C G A T C T G A C T C G A G A T C C G T A A C T G A G T C A G T C C G T A A T C G C T G A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TCYCACAGCYASRGGG---
----ATTGCCTGAGGCGAA
 C G A T G T A C G A T C T G A C T C G A G A T C C G T A A C T G A G T C A G T C C G T A A T C G C T G A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TCYCACAGCYASRGGG---
----ATTCCCTGAGGGGAA
 C G A T G T A C G A T C T G A C T C G A G A T C C G T A A C T G A G T C A G T C C G T A A T C G C T G A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TCYCACAGCYASRGGG
CCGCATAGCAACGGA-
 C G A T G T A C G A T C T G A C T C G A G A T C C G T A A C T G A G T C A G T C C G T A A T C G C T G A A C T G A C T G A C T G
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:forward strand
Alignment:TCYCACAGCYASRGGG--
------TGTCAGGGGGCG
 C G A T G T A C G A T C T G A C T C G A G A T C C G T A A C T G A G T C A G T C C G T A A T C G C T G A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TCYCACAGCYASRGGG---
----ATTGCCTGAGGCAAT
 C G A T G T A C G A T C T G A C T C G A G A T C C G T A A C T G A G T C A G T C C G T A A T C G C T G A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TCYCACAGCYASRGGG-
------NGCCTGAGGCN
 C G A T G T A C G A T C T G A C T C G A G A T C C G T A A C T G A G T C A G T C C G T A A T C G C T G A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TCYCACAGCYASRGGG--
------TGCCCTNGGGCA
 C G A T G T A C G A T C T G A C T C G A G A T C C G T A A C T G A G T C A G T C C G T A A T C G C T G A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A