Information for 12-TTAGAAACTTGAT (Motif 16)

A C G T A G C T C G T A T A C G C G T A C T G A G C T A G A T C A G C T C G A T T C A G C T G A C G A T
Reverse Opposite:
G C T A G A C T A G T C G C T A T C G A C A T G C A G T A G C T A C G T A T G C G A C T T C G A G T C A
p-value:1e-6
log p-value:-1.463e+01
Information Content per bp:1.673
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif144.2
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets42.8 +/- 27.4bp
Average Position of motif in Background50.5 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTAGAAACTTGAT
TTTGAAACCG---
 A C G T A G C T C G T A T A C G C G T A C T G A G C T A G A T C A G C T C G A T T C A G C T G A C G A T
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTAGAAACTTGAT--
---GWAAYHTGAKMC
 A C G T A G C T C G T A T A C G C G T A C T G A G C T A G A T C A G C T C G A T T C A G C T G A C G A T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TTAGAAACTTGAT
TATCATTAGAACGCT---
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A T A C G C G T A C T G A G C T A G A T C A G C T C G A T T C A G C T G A C G A T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTAGAAACTTGAT--
---GWAAYHTGABMC
 A C G T A G C T C G T A T A C G C G T A C T G A G C T A G A T C A G C T C G A T T C A G C T G A C G A T A C G T A C G T
A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PB0187.1_Tcf7_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TTAGAAACTTGAT
CCGTATTATAAACAA---
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A T A C G C G T A C T G A G C T A G A T C A G C T C G A T T C A G C T G A C G A T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTAGAAACTTGAT
GGTTAGAGACCT---
 A C G T A C G T A C G T A G C T C G T A T A C G C G T A C T G A G C T A G A T C A G C T C G A T T C A G C T G A C G A T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTAGAAACTTGAT
CGTATCGAAACCAAA-
 A C G T A C G T A C G T A C G T A G C T C G T A T A C G C G T A C T G A G C T A G A T C A G C T C G A T T C A G C T G A C G A T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTAGAAACTTGAT
ACTGAAACCA---
 A C G T A G C T C G T A T A C G C G T A C T G A G C T A G A T C A G C T C G A T T C A G C T G A C G A T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TTAGAAACTTGAT
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A T A C G C G T A C T G A G C T A G A T C A G C T C G A T T C A G C T G A C G A T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTAGAAACTTGAT
AATGGAAAAT----
 A C G T A C G T A G C T C G T A T A C G C G T A C T G A G C T A G A T C A G C T C G A T T C A G C T G A C G A T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T