Information for 10-TAACAAGTTC (Motif 13)

A C G T C G T A C G T A A G T C C G T A C G T A A C T G A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A G T C A C G T A C G T A C T G A C G T A C G T C G T A
p-value:1e-7
log p-value:-1.661e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.5 +/- 33.9bp
Average Position of motif in Background52.5 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----TAACAAGTTC--
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C T G A C G T A C G T A G T C A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAACAAGTTC
GTTAACTAGN--
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C T G A C G T A C G T A G T C
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TAACAAGTTC---
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C T G A C G T A C G T A G T C A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TAACAAGTTC
NNCNNAACAATTNT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C T G A C G T A C G T A G T C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PH0085.1_Irx4/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TAACAAGTTC---
NNTTTTACATGTANNNT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C T G A C G T A C G T A G T C A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TAACAAGTTC
AAAAATAACAAACGG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C T G A C G T A C G T A G T C
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TAACAAGTTC--
NNNTAACAATTATAN
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C T G A C G T A C G T A G T C A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAACAAGTTC
GTAAACAAT---
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C T G A C G T A C G T A G T C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAACAAGTTC
-AACAAT---
 A C G T C G T A C G T A A G T C C G T A C G T A A C T G A C G T A C G T A G T C
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TAACAAGTTC
NAACAAT---
 A C G T C G T A C G T A A G T C C G T A C G T A A C T G A C G T A C G T A G T C
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T