Information for 11-CCACATGAAAAGG (Motif 12)

A G T C A G T C C G T A A T G C C G T A A C G T C T A G G T C A C G T A C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T A C G T A C G T A G T C G T C A A C G T A T C G A C G T A C T G A C T G
p-value:1e-7
log p-value:-1.704e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.2 +/- 31.8bp
Average Position of motif in Background75.0 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCACATGAAAAGG
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A T G C C G T A A C G T C T A G G T C A C G T A C G T A C G T A A C T G A C T G
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCACATGAAAAGG--
--ATATGCAAATNNN
 A G T C A G T C C G T A A T G C C G T A A C G T C T A G G T C A C G T A C G T A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCACATGAAAAGG-
--ACATCAAAGGNA
 A G T C A G T C C G T A A T G C C G T A A C G T C T A G G T C A C G T A C G T A C G T A A C T G A C T G A C G T
A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

Mycn/MA0104.3/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCACATGAAAAGG
GCCACGTG------
 A C G T A G T C A G T C C G T A A T G C C G T A A C G T C T A G G T C A C G T A C G T A C G T A A C T G A C T G
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCACATGAAAAGG
--ATATGCAAAT-
 A G T C A G T C C G T A A T G C C G T A A C G T C T A G G T C A C G T A C G T A C G T A A C T G A C T G
A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CCACATGAAAAGG---
----ANGNAAAGGTCA
 A G T C A G T C C G T A A T G C C G T A A C G T C T A G G T C A C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCACATGAAAAGG--
---TATGCWAATBAV
 A G T C A G T C C G T A A T G C C G T A A C G T C T A G G T C A C G T A C G T A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Myc/MA0147.2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCACATGAAAAGG
AAGCACATGG-----
 A C G T A C G T A G T C A G T C C G T A A T G C C G T A A C G T C T A G G T C A C G T A C G T A C G T A A C T G A C T G
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCACATGAAAAGG
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A T G C C G T A A C G T C T A G G T C A C G T A C G T A C G T A A C T G A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCACATGAAAAGG
--ACWTCAAAGG-
 A G T C A G T C C G T A A T G C C G T A A C G T C T A G G T C A C G T A C G T A C G T A A C T G A C T G
A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T