Information for 5-AATNTTTAAATATTTA (Motif 10)

G T C A C G T A A C G T T A C G C G A T C G A T A C G T C G T A G T C A C T G A G A C T G C T A A C G T A C G T C G A T C G T A
Reverse Opposite:
G C A T G C T A G T C A C G T A C A G T C G T A G A C T A C G T A C G T T C G A G C T A C G T A A T G C C G T A C G A T C A G T
p-value:1e-8
log p-value:-1.999e+01
Information Content per bp:1.680
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif27.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets48.5 +/- 27.1bp
Average Position of motif in Background44.8 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AATNTTTAAATATTTA
--NNTNNCAATATTAG
 G T C A C G T A A C G T T A C G C G A T C G A T A C G T C G T A G T C A C T G A G A C T G C T A A C G T A C G T C G A T C G T A
A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AATNTTTAAATATTTA
--NNTNNCAATATTAG
 G T C A C G T A A C G T T A C G C G A T C G A T A C G T C G T A G T C A C T G A G A C T G C T A A C G T A C G T C G A T C G T A
A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AATNTTTAAATATTTA
---GGTTAAACATTAA
 G T C A C G T A A C G T T A C G C G A T C G A T A C G T C G T A G T C A C T G A G A C T G C T A A C G T A C G T C G A T C G T A
A C G T A C G T A C G T C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

FOXB1/MA0845.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AATNTTTAAATATTTA
--TATGTAAATAT---
 G T C A C G T A A C G T T A C G C G A T C G A T A C G T C G T A G T C A C T G A G A C T G C T A A C G T A C G T C G A T C G T A
A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AATNTTTAAATATTTA
-ATATTTACATA----
 G T C A C G T A A C G T T A C G C G A T C G A T A C G T C G T A G T C A C T G A G A C T G C T A A C G T A C G T C G A T C G T A
A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T A C G T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AATNTTTAAATATTTA-
-----TTAATNATTAAC
 G T C A C G T A A C G T T A C G C G A T C G A T A C G T C G T A G T C A C T G A G A C T G C T A A C G T A C G T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AATNTTTAAATATTTA
---ATTTGAATT----
 G T C A C G T A A C G T T A C G C G A T C G A T A C G T C G T A G T C A C T G A G A C T G C T A A C G T A C G T C G A T C G T A
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AATNTTTAAATATTTA--
---NGTTAATNATTAACN
 G T C A C G T A A C G T T A C G C G A T C G A T A C G T C G T A G T C A C T G A G A C T G C T A A C G T A C G T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

HNF1B/MA0153.2/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AATNTTTAAATATTTA-
----GTTAATNATTAAC
 G T C A C G T A A C G T T A C G C G A T C G A T A C G T C G T A G T C A C T G A G A C T G C T A A C G T A C G T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C

PH0018.1_Dbx1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AATNTTTAAATATTTA
TNATTATTAATTAATTA
 A C G T G T C A C G T A A C G T T A C G C G A T C G A T A C G T C G T A G T C A C T G A G A C T G C T A A C G T A C G T C G A T C G T A
G A C T C G T A G C T A A G C T G A C T C G T A C G A T G C A T C G T A C G T A G C A T C G A T C G T A C G T A G A C T C G A T C T G A