Information for 7-CGCGCAGACGGAA (Motif 12)

A G T C A C T G A G T C A T C G A G T C C G T A A C T G G T C A A T G C A C T G A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T G T A C A G T C A T C G A C G T A G T C A C G T A C T G A T G C A C T G A G T C C T A G
p-value:1e-9
log p-value:-2.162e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.6 +/- 13.0bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CGCGCAGACGGAA
---CCAGACAG--
 A G T C A C T G A G T C A T C G A G T C C G T A A C T G G T C A A T G C A C T G A C T G C G T A C G T A
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CGCGCAGACGGAA
---CCAGACRSVB
 A G T C A C T G A G T C A T C G A G T C C G T A A C T G G T C A A T G C A C T G A C T G C G T A C G T A
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGCGCAGACGGAA
TGCGCAGGCGC--
 A G T C A C T G A G T C A T C G A G T C C G T A A C T G G T C A A T G C A C T G A C T G C G T A C G T A
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T

PB0011.1_Ehf_1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGCGCAGACGGAA----
--AGGACCCGGAAGTAA
 A G T C A C T G A G T C A T C G A G T C C G T A A C T G G T C A A T G C A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T G C A A C T G C A T G C G T A A G T C T A G C T G A C C T A G A C T G C G T A C G T A T C A G G A C T C G T A C T G A

ELF5/MA0136.2/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CGCGCAGACGGAA---
-----ACCCGGAAGTA
 A G T C A C T G A G T C A T C G A G T C C G T A A C T G G T C A A T G C A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CGCGCAGACGGAA---
------RCCGGAAGTD
 A G T C A C T G A G T C A T C G A G T C C G T A A C T G G T C A A T G C A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGCGCAGACGGAA-
CCACACAGCAGGAGA
 A C G T A G T C A C T G A G T C A T C G A G T C C G T A A C T G G T C A A T G C A C T G A C T G C G T A C G T A A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGCGCAGACGGAA--
-----AVCAGGAAGT
 A G T C A C T G A G T C A T C G A G T C C G T A A C T G G T C A A T G C A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CGCGCAGACGGAA---
------RCCGGAARYN
 A G T C A C T G A G T C A T C G A G T C C G T A A C T G G T C A A T G C A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CGCGCAGACGGAA---
------DCCGGAARYN
 A G T C A C T G A G T C A T C G A G T C C G T A A C T G G T C A A T G C A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G