Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-160 | -3.691e+02 | 0.0000 | 320.0 | 45.07% | 3431.8 | 7.63% | motif file (matrix) |
svg |
2 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-156 | -3.597e+02 | 0.0000 | 339.0 | 47.75% | 4096.9 | 9.11% | motif file (matrix) |
svg |
3 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-120 | -2.769e+02 | 0.0000 | 308.0 | 43.38% | 4365.2 | 9.71% | motif file (matrix) |
svg |
4 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-95 | -2.210e+02 | 0.0000 | 306.0 | 43.10% | 5341.5 | 11.88% | motif file (matrix) |
svg |
5 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-67 | -1.549e+02 | 0.0000 | 191.0 | 26.90% | 2774.1 | 6.17% | motif file (matrix) |
svg |
6 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-60 | -1.401e+02 | 0.0000 | 186.0 | 26.20% | 2891.0 | 6.43% | motif file (matrix) |
svg |
7 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-33 | -7.731e+01 | 0.0000 | 382.0 | 53.80% | 14228.3 | 31.64% | motif file (matrix) |
svg |
8 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-27 | -6.443e+01 | 0.0000 | 114.0 | 16.06% | 2189.0 | 4.87% | motif file (matrix) |
svg |
9 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-16 | -3.884e+01 | 0.0000 | 229.0 | 32.25% | 8486.3 | 18.87% | motif file (matrix) |
svg |
10 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-15 | -3.615e+01 | 0.0000 | 330.0 | 46.48% | 14279.0 | 31.75% | motif file (matrix) |
svg |
11 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-9 | -2.191e+01 | 0.0000 | 45.0 | 6.34% | 969.3 | 2.16% | motif file (matrix) |
svg |
12 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-8 | -1.951e+01 | 0.0000 | 178.0 | 25.07% | 7404.3 | 16.46% | motif file (matrix) |
svg |
13 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-8 | -1.864e+01 | 0.0000 | 151.0 | 21.27% | 6060.0 | 13.47% | motif file (matrix) |
svg |
14 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-7 | -1.780e+01 | 0.0000 | 29.0 | 4.08% | 535.0 | 1.19% | motif file (matrix) |
svg |
15 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-7 | -1.722e+01 | 0.0000 | 139.0 | 19.58% | 5566.2 | 12.38% | motif file (matrix) |
svg |
16 |
| TATA-Box(TBP)/Promoter/Homer | 1e-5 | -1.174e+01 | 0.0002 | 99.0 | 13.94% | 4019.7 | 8.94% | motif file (matrix) |
svg |
17 |
| Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-4 | -1.095e+01 | 0.0004 | 100.0 | 14.08% | 4152.9 | 9.23% | motif file (matrix) |
svg |
18 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.408e+00 | 0.0017 | 19.0 | 2.68% | 431.7 | 0.96% | motif file (matrix) |
svg |
19 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-4 | -9.387e+00 | 0.0017 | 37.0 | 5.21% | 1177.6 | 2.62% | motif file (matrix) |
svg |
20 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.340e+00 | 0.0043 | 35.0 | 4.93% | 1151.5 | 2.56% | motif file (matrix) |
svg |
21 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.267e+00 | 0.0121 | 23.0 | 3.24% | 681.2 | 1.51% | motif file (matrix) |
svg |
22 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-3 | -7.227e+00 | 0.0121 | 87.0 | 12.25% | 3893.7 | 8.66% | motif file (matrix) |
svg |
23 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-3 | -7.177e+00 | 0.0121 | 9.0 | 1.27% | 150.4 | 0.33% | motif file (matrix) |
svg |
24 |
| RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer | 1e-3 | -7.051e+00 | 0.0131 | 49.0 | 6.90% | 1923.8 | 4.28% | motif file (matrix) |
svg |
25 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.038e+00 | 0.0131 | 55.0 | 7.75% | 2228.9 | 4.96% | motif file (matrix) |
svg |
26 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -6.886e+00 | 0.0143 | 67.0 | 9.44% | 2867.7 | 6.38% | motif file (matrix) |
svg |
27 |
| RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer | 1e-2 | -6.736e+00 | 0.0160 | 33.0 | 4.65% | 1167.6 | 2.60% | motif file (matrix) |
svg |
28 |
| Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer | 1e-2 | -6.378e+00 | 0.0221 | 99.0 | 13.94% | 4671.5 | 10.39% | motif file (matrix) |
svg |
29 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-2 | -6.281e+00 | 0.0235 | 51.0 | 7.18% | 2100.7 | 4.67% | motif file (matrix) |
svg |
30 |
| Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.186e+00 | 0.0250 | 10.0 | 1.41% | 208.8 | 0.46% | motif file (matrix) |
svg |
31 |
| Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer | 1e-2 | -6.092e+00 | 0.0265 | 22.0 | 3.10% | 702.8 | 1.56% | motif file (matrix) |
svg |
32 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-2 | -6.071e+00 | 0.0265 | 135.0 | 19.01% | 6762.5 | 15.04% | motif file (matrix) |
svg |
33 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.030e+00 | 0.0265 | 33.0 | 4.65% | 1221.4 | 2.72% | motif file (matrix) |
svg |
34 |
| RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.955e+00 | 0.0278 | 33.0 | 4.65% | 1227.1 | 2.73% | motif file (matrix) |
svg |
35 |
| Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer | 1e-2 | -5.950e+00 | 0.0278 | 42.0 | 5.92% | 1674.1 | 3.72% | motif file (matrix) |
svg |
36 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -5.888e+00 | 0.0280 | 38.0 | 5.35% | 1479.8 | 3.29% | motif file (matrix) |
svg |
37 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.823e+00 | 0.0291 | 15.0 | 2.11% | 414.5 | 0.92% | motif file (matrix) |
svg |
38 |
| Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer | 1e-2 | -5.443e+00 | 0.0415 | 113.0 | 15.92% | 5617.4 | 12.49% | motif file (matrix) |
svg |
39 |
| RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer | 1e-2 | -5.416e+00 | 0.0415 | 38.0 | 5.35% | 1523.2 | 3.39% | motif file (matrix) |
svg |
40 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-2 | -5.405e+00 | 0.0415 | 52.0 | 7.32% | 2249.5 | 5.00% | motif file (matrix) |
svg |
41 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.247e+00 | 0.0467 | 36.0 | 5.07% | 1438.7 | 3.20% | motif file (matrix) |
svg |
42 |
| NFY(CCAAT)/Promoter/Homer | 1e-2 | -5.161e+00 | 0.0497 | 41.0 | 5.77% | 1702.4 | 3.79% | motif file (matrix) |
svg |
43 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -5.161e+00 | 0.0497 | 29.0 | 4.08% | 1097.9 | 2.44% | motif file (matrix) |
svg |
44 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-2 | -5.085e+00 | 0.0512 | 26.0 | 3.66% | 957.4 | 2.13% | motif file (matrix) |
svg |
45 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.074e+00 | 0.0512 | 52.0 | 7.32% | 2289.3 | 5.09% | motif file (matrix) |
svg |
46 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.032e+00 | 0.0517 | 78.0 | 10.99% | 3713.6 | 8.26% | motif file (matrix) |
svg |
47 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-2 | -4.808e+00 | 0.0633 | 46.0 | 6.48% | 2003.9 | 4.46% | motif file (matrix) |
svg |