Information for 4-ATARGTGCCATCA (Motif 4)

G C T A A C G T C G T A T C A G T A C G C A G T A C T G A T G C A G T C C G T A A C G T G T A C C G T A
Reverse Opposite:
C G A T A C T G C G T A G C A T C T A G T A C G G T A C G T C A A T G C A G T C A C G T C G T A C G A T
p-value:1e-16
log p-value:-3.775e+01
Information Content per bp:1.701
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.96%
Number of Background Sequences with motif99.6
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets51.8 +/- 23.6bp
Average Position of motif in Background46.0 +/- 37.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:ATARGTGCCATCA--
-----GGCCATTAAC
 G C T A A C G T C G T A T C A G T A C G C A G T A C T G A T G C A G T C C G T A A C G T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ATARGTGCCATCA
--GTCCGCCATTA
 G C T A A C G T C G T A T C A G T A C G C A G T A C T G A T G C A G T C C G T A A C G T G T A C C G T A
A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ATARGTGCCATCA--
---GCNGCCATCTTG
 G C T A A C G T C G T A T C A G T A C G C A G T A C T G A T G C A G T C C G T A A C G T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATARGTGCCATCA
RGTTAGTGCCCY--
 A C G T G C T A A C G T C G T A T C A G T A C G C A G T A C T G A T G C A G T C C G T A A C G T G T A C C G T A
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATARGTGCCATCA----
----ATGACATCATCNN
 G C T A A C G T C G T A T C A G T A C G C A G T A C T G A T G C A G T C C G T A A C G T G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ATARGTGCCATCA
----ATGCCAACC
 G C T A A C G T C G T A T C A G T A C G C A G T A C T G A T G C A G T C C G T A A C G T G T A C C G T A
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ATARGTGCCATCA
--AGGTGTCA---
 G C T A A C G T C G T A T C A G T A C G C A G T A C T G A T G C A G T C C G T A A C G T G T A C C G T A
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:ATARGTGCCATCA---
------GCCATCTGTT
 G C T A A C G T C G T A T C A G T A C G C A G T A C T G A T G C A G T C C G T A A C G T G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ATARGTGCCATCA--
---GCCGCCATCTTG
 G C T A A C G T C G T A T C A G T A C G C A G T A C T G A T G C A G T C C G T A A C G T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ATARGTGCCATCA
---CGTGCCAAG-
 G C T A A C G T C G T A T C A G T A C G C A G T A C T G A T G C A G T C C G T A A C G T G T A C C G T A
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T