Information for 19-ATTGCCACTATAAATA (Motif 28)

G C T A A G C T A C G T C A T G T G A C G A T C C G T A G A T C G A C T C G T A G C A T G T C A C T G A C G T A C A G T C G T A
Reverse Opposite:
A C G T G T C A C G A T A G C T C A G T C G T A A C G T C G T A C T A G G C A T C T A G A C T G G T A C G T C A T C G A C A G T
p-value:1e-7
log p-value:-1.741e+01
Information Content per bp:1.674
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif127.1
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets47.5 +/- 28.7bp
Average Position of motif in Background51.7 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2D/MA0773.1/Jaspar

Match Rank:1
Score:0.66
Offset:6
Orientation:forward strand
Alignment:ATTGCCACTATAAATA--
------ACTATAAATAGA
 G C T A A G C T A C G T C A T G T G A C G A T C C G T A G A T C G A C T C G T A G C A T G T C A C T G A C G T A C A G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.65
Offset:6
Orientation:forward strand
Alignment:ATTGCCACTATAAATA--
------GCTATAAATAGC
 G C T A A G C T A C G T C A T G T G A C G A T C C G T A G A T C G A C T C G T A G C A T G T C A C T G A C G T A C A G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.65
Offset:6
Orientation:forward strand
Alignment:ATTGCCACTATAAATA--
------TCTAAAAATAGA
 G C T A A G C T A C G T C A T G T G A C G A T C C G T A G A T C G A C T C G T A G C A T G T C A C T G A C G T A C A G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:6
Orientation:forward strand
Alignment:ATTGCCACTATAAATA--
------DCYAAAAATAGM
 G C T A A G C T A C G T C A T G T G A C G A T C C G T A G A T C G A C T C G T A G C A T G T C A C T G A C G T A C A G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATTGCCACTATAAATA--
--TGCCAAAATAAACANN
 G C T A A G C T A C G T C A T G T G A C G A T C C G T A G A T C G A C T C G T A G C A T G T C A C T G A C G T A C A G T C G T A A C G T A C G T
A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:ATTGCCACTATAAATA--
------GCTAAAAATAGC
 G C T A A G C T A C G T C A T G T G A C G A T C C G T A G A T C G A C T C G T A G C A T G T C A C T G A C G T A C A G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ATTGCCACTATAAATA---
----ATGCTAAAAATAGAA
 G C T A A G C T A C G T C A T G T G A C G A T C C G T A G A T C G A C T C G T A G C A T G T C A C T G A C G T A C A G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:ATTGCCACTATAAATA--
------KCCAAAAATAGC
 G C T A A G C T A C G T C A T G T G A C G A T C C G T A G A T C G A C T C G T A G C A T G T C A C T G A C G T A C A G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

PB0069.1_Sox21_1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ATTGCCACTATAAATA--
--TTTAATTATAATTAAG
 G C T A A G C T A C G T C A T G T G A C G A T C C G T A G A T C G A C T C G T A G C A T G T C A C T G A C G T A C A G T C G T A A C G T A C G T
A C G T A C G T G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATTGCCACTATAAATA
ATTTGCATAACAATG-
 G C T A A G C T A C G T C A T G T G A C G A T C C G T A G A T C G A C T C G T A G C A T G T C A C T G A C G T A C A G T C G T A
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T