Information for 4-TGATTGCCCT (Motif 2)

C A G T T C A G C G T A A C G T A C G T T C A G T A G C A G T C A G T C G A C T
Reverse Opposite:
C T G A T C A G C T A G A T C G A G T C C G T A C G T A A C G T A G T C G T C A
p-value:1e-34
log p-value:-7.862e+01
Information Content per bp:1.693
Number of Target Sequences with motif94.0
Percentage of Target Sequences with motif13.24%
Number of Background Sequences with motif1265.1
Percentage of Background Sequences with motif2.81%
Average Position of motif in Targets49.4 +/- 24.7bp
Average Position of motif in Background48.7 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGCCCT
TTGATTGN---
 A C G T C A G T T C A G C G T A A C G T A C G T T C A G T A G C A G T C A G T C G A C T
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGCCCT
NTAATTGG---
 A C G T C A G T T C A G C G T A A C G T A C G T T C A G T A G C A G T C A G T C G A C T
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGCCCT
CCGATTGGCT-
 A C G T C A G T T C A G C G T A A C G T A C G T T C A G T A G C A G T C A G T C G A C T
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

EN2/MA0642.1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TGATTGCCCT
GNTAATTGGN--
 A C G T A C G T C A G T T C A G C G T A A C G T A C G T T C A G T A G C A G T C A G T C G A C T
T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G A C G T A C G T

GBX2/MA0890.1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TGATTGCCCT
NNTAATTGNN--
 A C G T A C G T C A G T T C A G C G T A A C G T A C G T T C A G T A G C A G T C A G T C G A C T
T A C G A G T C C G A T T G C A T G C A A C G T A G C T C T A G T A C G A G C T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGCCCT
NTAATTGN---
 A C G T C A G T T C A G C G T A A C G T A C G T T C A G T A G C A G T C A G T C G A C T
A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T A C G T

EN1/MA0027.2/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGCCCT
CTAATTAG---
 A C G T C A G T T C A G C G T A A C G T A C G T T C A G T A G C A G T C A G T C G A C T
A G T C G C A T T C G A C G T A A C G T A C G T C T G A T A C G A C G T A C G T A C G T

Nobox/MA0125.1/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TGATTGCCCT
TAATTGGT--
 C A G T T C A G C G T A A C G T A C G T T C A G T A G C A G T C A G T C G A C T
A G C T C G T A C G T A A C G T C A G T C T A G A T C G A G C T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGCCCT
NTAATTGG---
 A C G T C A G T T C A G C G T A A C G T A C G T T C A G T A G C A G T C A G T C G A C T
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGCCCT
NTAATTGN---
 A C G T C A G T T C A G C G T A A C G T A C G T T C A G T A G C A G T C A G T C G A C T
C G A T G C A T T G C A C G T A C A G T C A G T C T A G A T G C A C G T A C G T A C G T