Information for 11-CCATAATAAAAAG (Motif 9)

G T A C A G T C C T G A A G C T C G T A C G T A A C G T T C G A C G T A C G T A G T C A G T C A A C T G
Reverse Opposite:
T A G C A C G T A C G T A C G T C G A T A C G T G T C A C G A T C G A T C T G A A G C T A C T G A C T G
p-value:1e-11
log p-value:-2.568e+01
Information Content per bp:1.805
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif22.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets59.1 +/- 17.5bp
Average Position of motif in Background48.8 +/- 42.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCATAATAAAAAG-
AAATAAGAAAAAAC
 G T A C A G T C C T G A A G C T C G T A C G T A A C G T T C G A C G T A C G T A G T C A G T C A A C T G A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

HOXA13/MA0650.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCATAATAAAAAG
--CCAATAAAAA-
 G T A C A G T C C T G A A G C T C G T A C G T A A C G T T C G A C G T A C G T A G T C A G T C A A C T G
A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCATAATAAAAAG
--GTCATAAAAN-
 G T A C A G T C C T G A A G C T C G T A C G T A A C G T T C G A C G T A C G T A G T C A G T C A A C T G
A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCATAATAAAAAG
-GGTAATAAAAA-
 G T A C A G T C C T G A A G C T C G T A C G T A A C G T T C G A C G T A C G T A G T C A G T C A A C T G
A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCATAATAAAAAG
--CCAATAAAAA-
 G T A C A G T C C T G A A G C T C G T A C G T A A C G T T C G A C G T A C G T A G T C A G T C A A C T G
A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T

CDX1/MA0878.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCATAATAAAAAG
--GCAATAAAA--
 G T A C A G T C C T G A A G C T C G T A C G T A A C G T T C G A C G T A C G T A G T C A G T C A A C T G
A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCATAATAAAAAG
-NCYAATAAAA--
 G T A C A G T C C T G A A G C T C G T A C G T A A C G T T C G A C G T A C G T A G T C A G T C A A C T G
A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCATAATAAAAAG
--GCAATAAAAA-
 G T A C A G T C C T G A A G C T C G T A C G T A A C G T T C G A C G T A C G T A G T C A G T C A A C T G
A C G T A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCATAATAAAAAG
-CCYMATAAAA--
 G T A C A G T C C T G A A G C T C G T A C G T A A C G T T C G A C G T A C G T A G T C A G T C A A C T G
A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCATAATAAAAAG--
TAGGTAATAAAATTCA
 A C G T G T A C A G T C C T G A A G C T C G T A C G T A A C G T T C G A C G T A C G T A G T C A G T C A A C T G A C G T A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A