Information for 3-MTGTAATTAC (Motif 2)

T G A C C G A T C T A G A G C T T C G A C G T A A C G T G C A T C T G A G T A C
Reverse Opposite:
C A T G G A C T C G T A C G T A A C G T A G C T T C G A G A T C G C T A A C T G
p-value:1e-40
log p-value:-9.348e+01
Information Content per bp:1.645
Number of Target Sequences with motif200.0
Percentage of Target Sequences with motif27.25%
Number of Background Sequences with motif4365.7
Percentage of Background Sequences with motif9.75%
Average Position of motif in Targets47.0 +/- 25.0bp
Average Position of motif in Background50.3 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0061.1_Hoxb6/Jaspar

Match Rank:1
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-MTGTAATTAC-----
NNNGTAATTACNNATA
 A C G T T G A C C G A T C T A G A G C T T C G A C G T A A C G T G C A T C T G A G T A C A C G T A C G T A C G T A C G T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

MEOX2/MA0706.1/Jaspar

Match Rank:2
Score:0.85
Offset:1
Orientation:forward strand
Alignment:MTGTAATTAC-
-AGTAATTAAC
 T G A C C G A T C T A G A G C T T C G A C G T A A C G T G C A T C T G A G T A C A C G T
A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

PH0072.1_Hoxc8/Jaspar

Match Rank:3
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-MTGTAATTAC-----
ACNNTAATTACNNCAN
 A C G T T G A C C G A T C T A G A G C T T C G A C G T A A C G T G C A T C T G A G T A C A C G T A C G T A C G T A C G T A C G T
T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A

MEOX1/MA0661.1/Jaspar

Match Rank:4
Score:0.83
Offset:1
Orientation:forward strand
Alignment:MTGTAATTAC-
-GCTAATTAAC
 T G A C C G A T C T A G A G C T T C G A C G T A A C G T G C A T C T G A G T A C A C G T
A C G T T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C

PH0053.1_Hoxa6/Jaspar

Match Rank:5
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-MTGTAATTAC-----
AAGGTAATTACCTAAT
 A C G T T G A C C G A T C T A G A G C T T C G A C G T A A C G T G C A T C T G A G T A C A C G T A C G T A C G T A C G T A C G T
T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

PH0022.1_Dlx3/Jaspar

Match Rank:6
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---MTGTAATTAC----
TCGCGATAATTACCGAC
 A C G T A C G T A C G T T G A C C G A T C T A G A G C T T C G A C G T A A C G T G C A T C T G A G T A C A C G T A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

EVX1/MA0887.1/Jaspar

Match Rank:7
Score:0.81
Offset:1
Orientation:forward strand
Alignment:MTGTAATTAC-
-GGTAATTAGC
 T G A C C G A T C T A G A G C T T C G A C G T A A C G T G C A T C T G A G T A C A C G T
A C G T T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C

HOXB2/MA0902.1/Jaspar

Match Rank:8
Score:0.81
Offset:1
Orientation:forward strand
Alignment:MTGTAATTAC-
-AGTAATTAAC
 T G A C C G A T C T A G A G C T T C G A C G T A A C G T G C A T C T G A G T A C A C G T
A C G T T C G A T A C G G A C T T G C A T C G A A C G T G A C T G C T A T C G A T G A C

PH0023.1_Dlx4/Jaspar

Match Rank:9
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---MTGTAATTAC----
GCGCTATAATTACCGAC
 A C G T A C G T A C G T T G A C C G A T C T A G A G C T T C G A C G T A A C G T G C A T C T G A G T A C A C G T A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C

PH0103.1_Meox1/Jaspar

Match Rank:10
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-MTGTAATTAC-----
GAGGTAATTACCTCAG
 A C G T T G A C C G A T C T A G A G C T T C G A C G T A A C G T G C A T C T G A G T A C A C G T A C G T A C G T A C G T A C G T
T C A G T G C A C A T G C A T G G A C T T G C A G C T A C A G T A C G T C T G A A T G C G T A C G A C T A G T C C G T A C T A G