Information for 6-SMTKGGTTGTAWATWS (Motif 10)

T A G C G T A C A C G T A C T G C T A G A C T G A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T G C A T A T C G
Reverse Opposite:
A T G C C G T A C G T A A C G T C G A T A C G T C G T A G T A C C G T A C G T A A G T C A G T C G T A C C G T A A C T G A T C G
p-value:1e-11
log p-value:-2.537e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.7 +/- 13.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0067.1_Hoxc12/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:SMTKGGTTGTAWATWS--
-TTAGGTCGTAAAATTTC
 T A G C G T A C A C G T A C T G C T A G A C T G A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T G C A T A T C G A C G T A C G T
A C G T G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

PH0077.1_Hoxd12/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:SMTKGGTTGTAWATWS--
-CAAGGTCGTAAAATCTT
 T A G C G T A C A C G T A C T G C T A G A C T G A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T G C A T A T C G A C G T A C G T
A C G T G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

HOXC12/MA0906.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:SMTKGGTTGTAWATWS
----GGTCGTAAAAA-
 T A G C G T A C A C G T A C T G C T A G A C T G A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T G C A T A T C G
A C G T A C G T A C G T A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:SMTKGGTTGTAWATWS
----GGTCGTAAAAT-
 T A G C G T A C A C G T A C T G C T A G A C T G A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T G C A T A T C G
A C G T A C G T A C G T A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:SMTKGGTTGTAWATWS--
-TAAGGTCGTAAAATCCT
 T A G C G T A C A C G T A C T G C T A G A C T G A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T G C A T A T C G A C G T A C G T
A C G T G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:SMTKGGTTGTAWATWS
-----GTCGTAAAAA-
 T A G C G T A C A C G T A C T G C T A G A C T G A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T G C A T A T C G
A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:SMTKGGTTGTAWATWS-
-TAAAGTCGTAAAACGT
 T A G C G T A C A C G T A C T G C T A G A C T G A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T G C A T A T C G A C G T
A C G T G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:SMTKGGTTGTAWATWS
----AGTCGTAAAAA-
 T A G C G T A C A C G T A C T G C T A G A C T G A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T G C A T A T C G
A C G T A C G T A C G T A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:SMTKGGTTGTAWATWS-
CTAAGGTTCTAGATCAC
 T A G C G T A C A C G T A C T G C T A G A C T G A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T G C A T A T C G A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

PB0098.1_Zfp410_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---SMTKGGTTGTAWATWS
TATTATGGGATGGATAA--
 A C G T A C G T A C G T T A G C G T A C A C G T A C T G C T A G A C T G A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T G C A T A T C G
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A A C G T A C G T