Information for 6-GCGAGACTAG (Motif 14)

A T C G A T G C A C T G C G T A A C T G C G T A A T G C A G C T G T C A A C T G
Reverse Opposite:
G T A C C A G T C T G A A T C G C G A T A G T C A C G T A G T C A T C G A T G C
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.849
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif60.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets50.6 +/- 32.1bp
Average Position of motif in Background42.8 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCGAGACTAG-
GNNACCGAGAATNNN
 A C G T A C G T A C G T A C G T A T C G A T G C A C T G C G T A A C T G C G T A A T G C A G C T G T C A A C T G A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

ZBTB33/MA0527.1/Jaspar

Match Rank:2
Score:0.63
Offset:-8
Orientation:reverse strand
Alignment:--------GCGAGACTAG
NAGNTCTCGCGAGAN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C T G C G T A A C T G C G T A A T G C A G C T G T C A A C T G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCGAGACTAG-
TTGACCGAGAATTCC
 A C G T A C G T A C G T A C G T A T C G A T G C A C T G C G T A A C T G C G T A A T G C A G C T G T C A A C T G A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

GFX(?)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCGAGACTAG
TCTCGCGAGAAT--
 A C G T A C G T A C G T A C G T A T C G A T G C A C T G C G T A A C T G C G T A A T G C A G C T G T C A A C T G
G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCGAGACTAG-
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A C G T A T C G A T G C A C T G C G T A A C T G C G T A A T G C A G C T G T C A A C T G A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCGAGACTAG
-BCAGACWA-
 A T C G A T G C A C T G C G T A A C T G C G T A A T G C A G C T G T C A A C T G
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCGAGACTAG---
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T A C G T A T C G A T G C A C T G C G T A A C T G C G T A A T G C A G C T G T C A A C T G A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCGAGACTAG
AGGTGHCAGACA--
 A C G T A C G T A C G T A C G T A T C G A T G C A C T G C G T A A C T G C G T A A T G C A G C T G T C A A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GCGAGACTAG
ATAAACCGAAACCAA
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C T G C G T A A C T G C G T A A T G C A G C T G T C A A C T G
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------GCGAGACTAG
GGNTCTCGCGAGAAC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C T G C G T A A C T G C G T A A T G C A G C T G T C A A C T G
T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C A C G T A C G T