Information for 3-AKWGCTGAGCTCAGCA (Motif 9)

T C G A C A T G G C A T A C T G A T G C G C A T C A T G G T C A A C T G T A G C A C G T A G T C G T C A T C A G G T A C C G T A
Reverse Opposite:
G C A T A C T G A G T C C A G T T C A G T G C A A T C G T G A C C A G T G T A C C G T A A T C G G T A C C G T A G T A C A C G T
p-value:1e-11
log p-value:-2.639e+01
Information Content per bp:1.587
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.1 +/- 19.3bp
Average Position of motif in Background63.0 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.59
Offset:9
Orientation:reverse strand
Alignment:AKWGCTGAGCTCAGCA----
---------GTCAGCANNTN
 T C G A C A T G G C A T A C T G A T G C G C A T C A T G G T C A A C T G T A G C A C G T A G T C G T C A T C A G G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Mafb/MA0117.2/Jaspar

Match Rank:2
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:AKWGCTGAGCTCAGCA----
--------NGTCAGCANTTT
 T C G A C A T G G C A T A C T G A T G C G C A T C A T G G T C A A C T G T A G C A C G T A G T C G T C A T C A G G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AKWGCTGAGCTCAGCA
----CAAAGGTCAG--
 T C G A C A T G G C A T A C T G A T G C G C A T C A T G G T C A A C T G T A G C A C G T A G T C G T C A T C A G G T A C C G T A
A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:AKWGCTGAGCTCAGCA-----
------HWWGTCAGCAWWTTT
 T C G A C A T G G C A T A C T G A T G C G C A T C A T G G T C A A C T G T A G C A C G T A G T C G T C A T C A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AKWGCTGAGCTCAGCA
------TGAGTCAGCA
 T C G A C A T G G C A T A C T G A T G C G C A T C A T G G T C A A C T G T A G C A C G T A G T C G T C A T C A G G T A C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:AKWGCTGAGCTCAGCA--
--------DCTCAGCAGG
 T C G A C A T G G C A T A C T G A T G C G C A T C A T G G T C A A C T G T A G C A C G T A G T C G T C A T C A G G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

MAFK/MA0496.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AKWGCTGAGCTCAGCA----
-----CTGAGTCAGCAATTT
 T C G A C A T G G C A T A C T G A T G C G C A T C A T G G T C A A C T G T A G C A C G T A G T C G T C A T C A G G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AKWGCTGAGCTCAGCA
----ATGACGTCAYYN
 T C G A C A T G G C A T A C T G A T G C G C A T C A T G G T C A A C T G T A G C A C G T A G T C G T C A T C A G G T A C C G T A
A C G T A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AKWGCTGAGCTCAGCA
GAGGTCAAAGGTCA---
 A C G T T C G A C A T G G C A T A C T G A T G C G C A T C A T G G T C A A C T G T A G C A C G T A G T C G T C A T C A G G T A C C G T A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AKWGCTGAGCTCAGCA
----ATGACGTCATCN
 T C G A C A T G G C A T A C T G A T G C G C A T C A T G G T C A A C T G T A G C A C G T A G T C G T C A T C A G G T A C C G T A
A C G T A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C