Information for 2-GGAGTAAACC (Motif 8)

C A T G A T C G C G T A A T C G G A C T C T G A C T G A T G C A A G T C A G T C
Reverse Opposite:
C T A G A C T G A C G T A G C T A G C T C T G A T A G C A C G T A T G C G T A C
p-value:1e-11
log p-value:-2.671e+01
Information Content per bp:1.763
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif284.4
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets54.6 +/- 25.5bp
Average Position of motif in Background51.4 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX2/MA0712.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTAAACC
NGGATTAA---
 A C G T C A T G A T C G C G T A A T C G G A C T C T G A C T G A T G C A A G T C A G T C
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGAGTAAACC--
-AAGTAAACAAA
 C A T G A T C G C G T A A T C G G A C T C T G A C T G A T G C A A G T C A G T C A C G T A C G T
A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

Pitx1/MA0682.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTAAACC
GGGATTAA---
 A C G T C A T G A T C G C G T A A T C G G A C T C T G A C T G A T G C A A G T C A G T C
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGAGTAAACC
--DGTAAACA
 C A T G A T C G C G T A A T C G G A C T C T G A C T G A T G C A A G T C A G T C
A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGAGTAAACC
VRGGATTARN--
 A C G T A C G T C A T G A T C G C G T A A T C G G A C T C T G A C T G A T G C A A G T C A G T C
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GGAGTAAACC
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A T C G C G T A A T C G G A C T C T G A C T G A T G C A A G T C A G T C
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

PH0124.1_Obox5_1/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGAGTAAACC--
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C G T A C G T C A T G A T C G C G T A A T C G G A C T C T G A C T G A T G C A A G T C A G T C A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGAGTAAACC---
-NDGTAAACARRN
 C A T G A T C G C G T A A T C G G A C T C T G A C T G A T G C A A G T C A G T C A C G T A C G T A C G T
A C G T G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A

PH0130.1_Otx2/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGAGTAAACC--
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T A C G T A C G T C A T G A T C G C G T A A T C G G A C T C T G A C T G A T G C A A G T C A G T C A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

FOXO3/MA0157.2/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGAGTAAACC-
---GTAAACAA
 C A T G A T C G C G T A A T C G G A C T C T G A C T G A T G C A A G T C A G T C A C G T
A C G T A C G T A C G T C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A