Information for 2-HGGCVAATGAAAC (Motif 3)

G A T C A C T G C T A G T A G C T A G C C G T A C G T A A C G T A C T G G T C A C G T A C G T A A G T C
Reverse Opposite:
A C T G C G A T A C G T A C G T A G T C C G T A A C G T A C G T A T C G A T C G G A T C G T A C C T A G
p-value:1e-15
log p-value:-3.632e+01
Information Content per bp:1.776
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.6 +/- 16.6bp
Average Position of motif in Background50.1 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:HGGCVAATGAAAC---
-GGAAANTGAAACTNA
 G A T C A C T G C T A G T A G C T A G C C G T A C G T A A C G T A C T G G T C A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.67
Offset:5
Orientation:forward strand
Alignment:HGGCVAATGAAAC--
-----ACTGAAACCA
 G A T C A C T G C T A G T A G C T A G C C G T A C G T A A C G T A C T G G T C A C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:HGGCVAATGAAAC-
--GAAAMTGAAACT
 G A T C A C T G C T A G T A G C T A G C C G T A C G T A A C G T A C T G G T C A C G T A C G T A A G T C A C G T
A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:HGGCVAATGAAAC-
--GGAAGTGAAAST
 G A T C A C T G C T A G T A G C T A G C C G T A C G T A A C G T A C T G G T C A C G T A C G T A A G T C A C G T
A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:HGGCVAATGAAAC
-CGGAAGTGAAAC
 G A T C A C T G C T A G T A G C T A G C C G T A C G T A A C G T A C T G G T C A C G T A C G T A A G T C
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

HOXB13/MA0901.1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:HGGCVAATGAAAC
---CCAATAAAAC
 G A T C A C T G C T A G T A G C T A G C C G T A C G T A A C G T A C T G G T C A C G T A C G T A A G T C
A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-HGGCVAATGAAAC--
ACTATGAATGAATGAT
 A C G T G A T C A C T G C T A G T A G C T A G C C G T A C G T A A C G T A C T G G T C A C G T A C G T A A G T C A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.63
Offset:5
Orientation:forward strand
Alignment:HGGCVAATGAAAC---
-----AATGTATCAAT
 G A T C A C T G C T A G T A G C T A G C C G T A C G T A A C G T A C T G G T C A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:HGGCVAATGAAAC
---CCAATAAAAA
 G A T C A C T G C T A G T A G C T A G C C G T A C G T A A C G T A C T G G T C A C G T A C G T A A G T C
A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

HOXA13/MA0650.1/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:HGGCVAATGAAAC
---CCAATAAAAA
 G A T C A C T G C T A G T A G C T A G C C G T A C G T A A C G T A C T G G T C A C G T A C G T A A G T C
A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A