Information for 3-ACAGCCCGAC (Motif 11)

C T G A T A G C G C T A T C A G A T G C A T G C G T A C C A T G G T C A A G T C
Reverse Opposite:
T C A G C A G T G T A C C A T G T A C G T A C G A G T C C G A T A T C G G A C T
p-value:1e-10
log p-value:-2.329e+01
Information Content per bp:1.656
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.02%
Number of Background Sequences with motif531.1
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets49.3 +/- 21.6bp
Average Position of motif in Background49.3 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACAGCCCGAC-
AGCAACAGCCGCACC
 A C G T A C G T A C G T A C G T C T G A T A G C G C T A T C A G A T G C A T G C G T A C C A T G G T C A A G T C A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCCCGAC
CACAGN-----
 A C G T C T G A T A G C G C T A T C A G A T G C A T G C G T A C C A T G G T C A A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ACAGCCCGAC--
----CCAGACAG
 C T G A T A G C G C T A T C A G A T G C A T G C G T A C C A T G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACAGCCCGAC------
CAAATCCAGACATCACA
 A C G T C T G A T A G C G C T A T C A G A T G C A T G C G T A C C A T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACAGCCCGAC-
-GAGSCCGAGC
 C T G A T A G C G C T A T C A G A T G C A T G C G T A C C A T G G T C A A G T C A C G T
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ACAGCCCGAC-
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T C T G A T A G C G C T A T C A G A T G C A T G C G T A C C A T G G T C A A G T C A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACAGCCCGAC------
TACGCCCCGCCACTCTG
 A C G T C T G A T A G C G C T A T C A G A T G C A T G C G T A C C A T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ACAGCCCGAC----
----CCAGACRSVB
 C T G A T A G C G C T A T C A G A T G C A T G C G T A C C A T G G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACAGCCCGAC-
-ATGCCAGACN
 C T G A T A G C G C T A T C A G A T G C A T G C G T A C C A T G G T C A A G T C A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ACAGCCCGAC
-CAGCC----
 C T G A T A G C G C T A T C A G A T G C A T G C G T A C C A T G G T C A A G T C
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T