Information for 10-AAAGGTACAAGTC (Motif 8)

C G T A G T C A C G T A A C T G C T A G A C G T G T C A G T A C C G T A G T C A A C T G A G C T A G T C
Reverse Opposite:
A C T G C T G A G T A C A C G T A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C G T
p-value:1e-12
log p-value:-2.780e+01
Information Content per bp:1.869
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.3 +/- 18.3bp
Average Position of motif in Background47.1 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAAGGTACAAGTC----
-GGGGTCAAAGTCCAAT
 C G T A G T C A C G T A A C T G C T A G A C G T G T C A G T A C C G T A G T C A A C T G A G C T A G T C A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGTACAAGTC
ANGNAAAGGTCA-----
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A A C T G C T A G A C G T G T C A G T A C C G T A G T C A A C T G A G C T A G T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAGGTACAAGTC
AAAGATCAAAGG-
 C G T A G T C A C G T A A C T G C T A G A C G T G T C A G T A C C G T A G T C A A C T G A G C T A G T C
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAAGGTACAAGTC
GGAGAAAGGTGCGA---
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A A C T G C T A G A C G T G T C A G T A C C G T A G T C A A C T G A G C T A G T C
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AAAGGTACAAGTC
TCTCAAAGGTCACGAG-
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A A C T G C T A G A C G T G T C A G T A C C G T A G T C A A C T G A G C T A G T C
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAAGGTACAAGTC-
--AGGTCAAGGTCA
 C G T A G T C A C G T A A C T G C T A G A C G T G T C A G T A C C G T A G T C A A C T G A G C T A G T C A C G T
A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

LEF1/MA0768.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAAGGTACAAGTC--
AAAGATCAAAGGGTT
 C G T A G T C A C G T A A C T G C T A G A C G T G T C A G T A C C G T A G T C A A C T G A G C T A G T C A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAAGGTACAAGTC
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T C G T A G T C A C G T A A C T G C T A G A C G T G T C A G T A C C G T A G T C A A C T G A G C T A G T C
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAAGGTACAAGTC-
--AGGTCAAGGTCA
 C G T A G T C A C G T A A C T G C T A G A C G T G T C A G T A C C G T A G T C A A C T G A G C T A G T C A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PH0087.1_Irx6/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AAAGGTACAAGTC
AAAATACATGTAAAAAT-
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A C G T A A C T G C T A G A C G T G T C A G T A C C G T A G T C A A C T G A G C T A G T C
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T A C G T