Information for 7-WGTTTTATGG (Motif 4)

C G A T T C A G C G A T A C G T A C G T A C G T C G T A A G C T C A T G T C A G
Reverse Opposite:
A G T C G T A C C T G A C G A T C G T A C G T A C G T A G C T A A G T C G C T A
p-value:1e-20
log p-value:-4.701e+01
Information Content per bp:1.758
Number of Target Sequences with motif81.0
Percentage of Target Sequences with motif10.53%
Number of Background Sequences with motif1477.2
Percentage of Background Sequences with motif3.10%
Average Position of motif in Targets47.5 +/- 26.5bp
Average Position of motif in Background49.8 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:WGTTTTATGG--
DGWTTTATGRCN
 C G A T T C A G C G A T A C G T A C G T A C G T C G T A A G C T C A T G T C A G A C G T A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

CDX1/MA0878.1/Jaspar

Match Rank:2
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:WGTTTTATGG-
--TTTTATTGC
 C G A T T C A G C G A T A C G T A C G T A C G T C G T A A G C T C A T G T C A G A C G T
A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:WGTTTTATGG---
--TTTTATGGCTN
 C G A T T C A G C G A T A C G T A C G T A C G T C G T A A G C T C A T G T C A G A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:WGTTTTATGG-
-NTTTTATGAC
 C G A T T C A G C G A T A C G T A C G T A C G T C G T A A G C T C A T G T C A G A C G T
A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.88
Offset:2
Orientation:reverse strand
Alignment:WGTTTTATGG--
--TTTTATTRGN
 C G A T T C A G C G A T A C G T A C G T A C G T C G T A A G C T C A T G T C A G A C G T A C G T
A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:WGTTTTATGG-
-NTTTTATTGG
 C G A T T C A G C G A T A C G T A C G T A C G T C G T A A G C T C A T G T C A G A C G T
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:WGTTTTATGG-
-NTTTTATTGG
 C G A T T C A G C G A T A C G T A C G T A C G T C G T A A G C T C A T G T C A G A C G T
A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:8
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:WGTTTTATGG--
TGATTTATGGCC
 C G A T T C A G C G A T A C G T A C G T A C G T C G T A A G C T C A T G T C A G A C G T A C G T
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:WGTTTTATGG-
-TTTTTATTGG
 C G A T T C A G C G A T A C G T A C G T A C G T C G T A A G C T C A T G T C A G A C G T
A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.86
Offset:2
Orientation:forward strand
Alignment:WGTTTTATGG--
--TTTTATKRGG
 C G A T T C A G C G A T A C G T A C G T A C G T C G T A A G C T C A T G T C A G A C G T A C G T
A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G