Information for 5-TCCGCCTTTT (Motif 6)

A G C T A T G C G A T C C A T G G T A C A G T C A G C T A G C T G A C T C A G T
Reverse Opposite:
G T C A C T G A T C G A T C G A T C A G A C T G G T A C C T A G T A C G T C G A
p-value:1e-13
log p-value:-3.074e+01
Information Content per bp:1.600
Number of Target Sequences with motif150.0
Percentage of Target Sequences with motif17.38%
Number of Background Sequences with motif4408.0
Percentage of Background Sequences with motif9.21%
Average Position of motif in Targets50.7 +/- 27.2bp
Average Position of motif in Background49.4 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPI1/MA0080.4/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TCCGCCTTTT
TACTTCCGCTTTTT
 A C G T A C G T A C G T A C G T A G C T A T G C G A T C C A T G G T A C A G T C A G C T A G C T G A C T C A G T
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCCGCCTTTT
GTCCGCCATTA
 A C G T A G C T A T G C G A T C C A T G G T A C A G T C A G C T A G C T G A C T C A G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TCCGCCTTTT
NAGCCCCGCCCCCN
 A C G T A C G T A C G T A C G T A G C T A T G C G A T C C A T G G T A C A G T C A G C T A G C T G A C T C A G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCCGCCTTTT---
GCCCCGCCCCCTCCC
 A C G T A C G T A G C T A T G C G A T C C A T G G T A C A G T C A G C T A G C T G A C T C A G T A C G T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TCCGCCTTTT--
----CCTTTGTT
 A G C T A T G C G A T C C A T G G T A C A G T C A G C T A G C T G A C T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TCCGCCTTTT
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T A C G T A G C T A T G C G A T C C A T G G T A C A G T C A G C T A G C T G A C T C A G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

SCRT2/MA0744.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCCGCCTTTT----
-CCACCTGTTGCAT
 A G C T A T G C G A T C C A T G G T A C A G T C A G C T A G C T G A C T C A G T A C G T A C G T A C G T A C G T
A C G T T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

SCRT1/MA0743.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCCGCCTTTT----
ANCCACCTGTTGCNC
 A C G T A G C T A T G C G A T C C A T G G T A C A G T C A G C T A G C T G A C T C A G T A C G T A C G T A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCCGCCTTTT
GCCCCGCCCCC-
 A C G T A C G T A G C T A T G C G A T C C A T G G T A C A G T C A G C T A G C T G A C T C A G T
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCCGCCTTTT
GCTCCGCCCMCY
 A C G T A C G T A G C T A T G C G A T C C A T G G T A C A G T C A G C T A G C T G A C T C A G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T