Information for 4-GCCTCACGTG (Motif 4)

A C T G G T A C G T A C C G A T T G A C C T G A T G A C C T A G A C G T A C T G
Reverse Opposite:
T G A C G T C A A G T C A C T G A G C T A C T G C G T A A C T G A C T G T G A C
p-value:1e-13
log p-value:-3.112e+01
Information Content per bp:1.831
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.90%
Number of Background Sequences with motif187.3
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets54.1 +/- 30.6bp
Average Position of motif in Background45.2 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Id2/MA0617.1/Jaspar

Match Rank:1
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:GCCTCACGTG-
---TCACGTGC
 A C T G G T A C G T A C C G A T T G A C C T G A T G A C C T A G A C G T A C T G A C G T
A C G T A C G T A C G T G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GCCTCACGTG-
-GGTCACGTGC
 A C T G G T A C G T A C C G A T T G A C C T G A T G A C C T A G A C G T A C T G A C G T
A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

BHLHE40/MA0464.2/Jaspar

Match Rank:3
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GCCTCACGTG--
--ATCACGTGAC
 A C T G G T A C G T A C C G A T T G A C C T G A T G A C C T A G A C G T A C T G A C G T A C G T
A C G T A C G T T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C

Arnt/MA0004.1/Jaspar

Match Rank:4
Score:0.76
Offset:4
Orientation:forward strand
Alignment:GCCTCACGTG
----CACGTG
 A C T G G T A C G T A C C G A T T G A C C T G A T G A C C T A G A C G T A C T G
A C G T A C G T A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:GCCTCACGTG--
----CACGTGBN
 A C T G G T A C G T A C C G A T T G A C C T G A T G A C C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:GCCTCACGTG---
---TCACGTGACC
 A C T G G T A C G T A C C G A T T G A C C T G A T G A C C T A G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:7
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GCCTCACGTG--------
NTNNTNGTCACGTGACNNNTNC
 A C G T A C G T A C G T A C G T A C T G G T A C G T A C C G A T T G A C C T G A T G A C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C A T C T G A A G C T C A G T T C A G T A C G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A G A T C A G C T T G A C G C A T C G A T G A T C G A T C

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:GCCTCACGTG--
----CACGTGNC
 A C T G G T A C G T A C C G A T T G A C C T G A T G A C C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.75
Offset:3
Orientation:forward strand
Alignment:GCCTCACGTG---
---KCACGTGMCN
 A C T G G T A C G T A C C G A T T G A C C T G A T G A C C T A G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:GCCTCACGTG--
----CACGTGDC
 A C T G G T A C G T A C C G A T T G A C C T G A T G A C C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C