Information for 13-GTGCCAGCAC (Motif 23)

A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G T C A C G T A C T G A C T G A G T C C G T A G T A C
p-value:1e-6
log p-value:-1.403e+01
Information Content per bp:1.960
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets34.6 +/- 30.2bp
Average Position of motif in Background43.1 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTGCCAGCAC
ATGCCAACC-
 A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A A G T C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTGCCAGCAC
TTGCCAAG--
 A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A A G T C
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GTGCCAGCAC
CGTGCCAAG--
 A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTGCCAGCAC-
SCTGTCARCACC
 A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A A G T C A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTGCCAGCAC
CTGCCCGCA-
 A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A A G T C
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTGCCAGCAC
TGAGTCAGCA-
 A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A A G T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTGCCAGCAC
-TGCCAA---
 A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A A G T C
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTGCCAGCAC---
ACTATGCCAACCTACC
 A C G T A C G T A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A A G T C A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTGCCAGCAC
GGTGCCAAGT-
 A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTGCCAGCAC-
GTACCCGCATN
 A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A A G T C A C G T
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G