Information for 12-TGAAGCCGAA (Motif 21)

A C G T A C T G C G T A C G T A A C T G G T A C A G T C A C T G C G T A G T C A
Reverse Opposite:
A C G T A C G T A G T C A C T G A C T G A G T C A C G T A C G T A G T C C G T A
p-value:1e-7
log p-value:-1.834e+01
Information Content per bp:1.937
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets69.5 +/- 18.0bp
Average Position of motif in Background50.7 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGAAGCCGAA
NGAAGC----
 A C G T A C T G C G T A C G T A A C T G G T A C A G T C A C T G C G T A G T C A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGAAGCCGAA---
TCGAAACCGAAACT
 A C G T A C G T A C T G C G T A C G T A A C T G G T A C A G T C A C T G C G T A G T C A A C G T A C G T A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

IRF9/MA0653.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGAAGCCGAA---
AACGAAACCGAAACT
 A C G T A C G T A C G T A C T G C G T A C G T A A C T G G T A C A G T C A C T G C G T A G T C A A C G T A C G T A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGAAGCCGAA---
-GAAACTGAAACT
 A C G T A C T G C G T A C G T A A C T G G T A C A G T C A C T G C G T A G T C A A C G T A C G T A C G T
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGAAGCCGAA
ACTGAAACCA--
 A C G T A C G T A C G T A C T G C G T A C G T A A C T G G T A C A G T C A C T G C G T A G T C A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:6
Score:0.58
Offset:-9
Orientation:forward strand
Alignment:---------TGAAGCCGAA-
NGTGTTCAVTSAAGCGKAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G G T A C A G T C A C T G C G T A G T C A A C G T
A G C T T A C G C G A T T C A G A G C T A C G T G A T C C T G A T A G C A G C T A T G C C T G A C G T A A T C G A G T C C T A G A C T G C T G A G T C A T C G A

IRF7/MA0772.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGAAGCCGAA---
ACGAAAGCGAAAGT
 A C G T A C G T A C T G C G T A C G T A A C T G G T A C A G T C A C T G C G T A G T C A A C G T A C G T A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGAAGCCGAA
TTTGAAACCG--
 A C G T A C G T A C G T A C T G C G T A C G T A A C T G G T A C A G T C A C T G C G T A G T C A
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGAAGCCGAA-
-GAGSCCGAGC
 A C G T A C T G C G T A C G T A A C T G G T A C A G T C A C T G C G T A G T C A A C G T
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGAAGCCGAA---
-GAAASYGAAASY
 A C G T A C T G C G T A C G T A A C T G G T A C A G T C A C T G C G T A G T C A A C G T A C G T A C G T
A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T