Information for 10-TTAATCAGAG (Motif 16)

A G C T C G A T C T G A C T G A G A C T G A T C C G T A A T C G C G T A C T A G
Reverse Opposite:
A G T C C G A T A T G C C G A T C T A G C T G A A G C T A G C T G C T A C T G A
p-value:1e-8
log p-value:-2.034e+01
Information Content per bp:1.831
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif121.3
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets48.2 +/- 24.6bp
Average Position of motif in Background51.6 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LBX1/MA0618.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTAATCAGAG
TTAATTAG--
 A G C T C G A T C T G A C T G A G A C T G A T C C G T A A T C G C G T A C T A G
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TTAATCAGAG
TCATCAATCA---
 A C G T A C G T A C G T A G C T C G A T C T G A C T G A G A C T G A T C C G T A A T C G C G T A C T A G
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TTAATCAGAG--
-AAATCACAGCA
 A G C T C G A T C T G A C T G A G A C T G A T C C G T A A T C G C G T A C T A G A C G T A C G T
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

NKX6-1/MA0674.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTAATCAGAG
TTAATTAN--
 A G C T C G A T C T G A C T G A G A C T G A T C C G T A A T C G C G T A C T A G
C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T A C G T

mix-a/MA0621.1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TTAATCAGAG
AATTAATTAGT-
 A C G T A C G T A G C T C G A T C T G A C T G A G A C T G A T C C G T A A T C G C G T A C T A G
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTAATCAGAG
CAAATCACTG
 A G C T C G A T C T G A C T G A G A C T G A T C C G T A A T C G C G T A C T A G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

OTX1/MA0711.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTAATCAGAG
TTAATCCG--
 A G C T C G A T C T G A C T G A G A C T G A T C C G T A A T C G C G T A C T A G
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T

PH0175.1_Vax2/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTAATCAGAG---
GNCTTAATTAGTGNNN
 A C G T A C G T A C G T A G C T C G A T C T G A C T G A G A C T G A T C C G T A A T C G C G T A C T A G A C G T A C G T A C G T
A C T G A G C T T G A C A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T T A C G A G T C G C T A T G A C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTAATCAGAG-
-AAATCACTGC
 A G C T C G A T C T G A C T G A G A C T G A T C C G T A A T C G C G T A C T A G A C G T
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Arid3b/MA0601.1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTAATCAGAG
ATATTAATTAA--
 A C G T A C G T A C G T A G C T C G A T C T G A C T G A G A C T G A T C C G T A A T C G C G T A C T A G
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T A C G T