Information for 3-CCTTTGGCCT (Motif 4)

G T A C A G T C G A C T A G C T A C G T C T A G T C A G G T A C G A T C A G C T
Reverse Opposite:
C T G A C T A G C A T G A G T C G A T C T G C A C T G A C T G A T C A G C A T G
p-value:1e-13
log p-value:-3.103e+01
Information Content per bp:1.636
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif11.12%
Number of Background Sequences with motif2308.1
Percentage of Background Sequences with motif4.79%
Average Position of motif in Targets46.6 +/- 25.9bp
Average Position of motif in Background49.6 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGGCCT-
TGACCTTTGCCCTA
 A C G T A C G T A C G T G T A C A G T C G A C T A G C T A C G T C T A G T C A G G T A C G A T C A G C T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGGCCT--
TGACCTTTGCCCTAN
 A C G T A C G T A C G T G T A C A G T C G A C T A G C T A C G T C T A G T C A G G T A C G A T C A G C T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGGCCT--
TGGACTTTGNNCTCN
 A C G T A C G T A C G T G T A C A G T C G A C T A G C T A C G T C T A G T C A G G T A C G A T C A G C T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CCTTTGGCCT-
TGACCTTTGCCCCA
 A C G T A C G T A C G T G T A C A G T C G A C T A G C T A C G T C T A G T C A G G T A C G A T C A G C T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGGCCT-
TGACCTTTGACCTC
 A C G T A C G T A C G T G T A C A G T C G A C T A G C T A C G T C T A G T C A G G T A C G A T C A G C T A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGGCCT-
TGACCTTTGACCTN
 A C G T A C G T A C G T G T A C A G T C G A C T A G C T A C G T C T A G T C A G G T A C G A T C A G C T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CCTTTGGCCT
TNCCTTTGATGT
 A C G T A C G T G T A C A G T C G A C T A G C T A C G T C T A G T C A G G T A C G A T C A G C T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CCTTTGGCCT
CCTTTGAWGT
 G T A C A G T C G A C T A G C T A C G T C T A G T C A G G T A C G A T C A G C T
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:9
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CCTTTGGCCT--
CCTTTGATCTTT
 G T A C A G T C G A C T A G C T A C G T C T A G T C A G G T A C G A T C A G C T A C G T A C G T
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTGGCCT--
AACCCTTTGATCTTT
 A C G T A C G T A C G T G T A C A G T C G A C T A G C T A C G T C T A G T C A G G T A C G A T C A G C T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T