Information for 13-AAGATTCCCC (Motif 30)

C G T A C G T A A C T G C G T A A C G T A C G T A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C T G C G T A C G T A A C G T A G T C A C G T A C G T
p-value:1e-5
log p-value:-1.287e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.8 +/- 26.3bp
Average Position of motif in Background49.1 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:AAGATTCCCC-
-----TCCCCA
 C G T A C G T A A C T G C G T A A C G T A C G T A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAGATTCCCC-
-RCATTCCWGG
 C G T A C G T A A C T G C G T A A C G T A C G T A G T C A G T C A G T C A G T C A C G T
A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAGATTCCCC-
AGGGGATTCCCCT
 A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C G T A G T C A G T C A G T C A G T C A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAGATTCCCC-
GGGGATTCCCCC
 A C G T C G T A C G T A A C T G C G T A A C G T A C G T A G T C A G T C A G T C A G T C A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

PB0204.1_Zfp740_2/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAGATTCCCC--------
-AAATTCCCCCCGGAAGT
 C G T A C G T A A C T G C G T A A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AAGATTCCCC-
----TTCCTCT
 C G T A C G T A A C T G C G T A A C G T A C G T A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

TEAD4/MA0809.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAGATTCCCC
CACATTCCAT
 C G T A C G T A A C T G C G T A A C G T A C G T A G T C A G T C A G T C A G T C
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

NFKB2/MA0778.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGATTCCCC-
AGGGGATTCCCCT
 A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C G T A G T C A G T C A G T C A G T C A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGATTCCCC
GGAAATTCCC-
 A C G T C G T A C G T A A C T G C G T A A C G T A C G T A G T C A G T C A G T C A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAGATTCCCC
CACATTCCAT
 C G T A C G T A A C T G C G T A A C G T A C G T A G T C A G T C A G T C A G T C
G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T