Information for 4-CACAGACTTTCGCTCC (Motif 13)

A G T C C G T A A G T C C G T A C T A G C G T A A G T C C G A T A G C T A C G T G T A C A C T G A G T C A C G T A G T C G T A C
Reverse Opposite:
A C T G C T A G C G T A C T A G G T A C A C T G C G T A C T G A C G T A A C T G A C G T A G T C A C G T A C T G C G A T A C T G
p-value:1e-10
log p-value:-2.487e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.6 +/- 27.6bp
Average Position of motif in Background36.4 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CACAGACTTTCGCTCC-
-----ACTTTCGTTTCT
 A G T C C G T A A G T C C G T A C T A G C G T A A G T C C G A T A G C T A C G T G T A C A C T G A G T C A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CACAGACTTTCGCTCC-
-----ACTTTCACTTTC
 A G T C C G T A A G T C C G T A C T A G C G T A A G T C C G A T A G C T A C G T G T A C A C T G A G T C A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CACAGACTTTCGCTCC--
---TCACTTTCACTTTCN
 A G T C C G T A A G T C C G T A C T A G C G T A A G T C C G A T A G C T A C G T G T A C A C T G A G T C A C G T A G T C G T A C A C G T A C G T
A C G T A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CACAGACTTTCGCTCC-
-----ASTTTCASTTYC
 A G T C C G T A A G T C C G T A C T A G C G T A A G T C C G A T A G C T A C G T G T A C A C T G A G T C A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CACAGACTTTCGCTCC-
-----ASTTTCACTTCC
 A G T C C G T A A G T C C G T A C T A G C G T A A G T C C G A T A G C T A C G T G T A C A C T G A G T C A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CACAGACTTTCGCTCC
-BCAGACWA-------
 A G T C C G T A A G T C C G T A C T A G C G T A A G T C C G A T A G C T A C G T G T A C A C T G A G T C A C G T A G T C G T A C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CACAGACTTTCGCTCC
-CCAGACRSVB-----
 A G T C C G T A A G T C C G T A C T A G C G T A A G T C C G A T A G C T A C G T G T A C A C T G A G T C A C G T A G T C G T A C
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CACAGACTTTCGCTCC
AAACCACAGAN---------
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C T A G C G T A A G T C C G A T A G C T A C G T G T A C A C T G A G T C A C G T A G T C G T A C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CACAGACTTTCGCTCC
----CACTTCCGCT--
 A G T C C G T A A G T C C G T A C T A G C G T A A G T C C G A T A G C T A C G T G T A C A C T G A G T C A C G T A G T C G T A C
A C G T A C G T A C G T A C G T G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.50
Offset:11
Orientation:forward strand
Alignment:CACAGACTTTCGCTCC-
-----------GCTCCG
 A G T C C G T A A G T C C G T A C T A G C G T A A G T C C G A T A G C T A C G T G T A C A C T G A G T C A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G