Information for 9-AGGAGGCGCCAAG (Motif 12)

C G T A A C T G A C T G G T C A A C T G A C T G A T G C A C T G A T G C A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G A T C G A G T C A T C G A G T C A G T C A C G T A G T C A G T C A C G T
p-value:1e-10
log p-value:-2.487e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 21.5bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGGAGGCGCCAAG---
CCTTCGGCGCCAAAAGG
 A C G T C G T A A C T G A C T G G T C A A C T G A C T G A T G C A C T G A T G C A G T C C G T A C G T A A C T G A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGGAGGCGCCAAG---
AGCTCGGCGCCAAAAGC
 A C G T C G T A A C T G A C T G G T C A A C T G A C T G A T G C A C T G A T G C A G T C C G T A C G T A A C T G A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGGAGGCGCCAAG
-TTTGGCGCCAAA
 C G T A A C T G A C T G G T C A A C T G A C T G A T G C A C T G A T G C A G T C C G T A C G T A A C T G
A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGGAGGCGCCAAG
----CGTGCCAAG
 C G T A A C T G A C T G G T C A A C T G A C T G A T G C A C T G A T G C A G T C C G T A C G T A A C T G
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AGGAGGCGCCAAG-
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G G T C A A C T G A C T G A T G C A C T G A T G C A G T C C G T A C G T A A C T G A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGGAGGCGCCAAG
GGGGGCGGGGC----
 A C G T A C G T C G T A A C T G A C T G G T C A A C T G A C T G A T G C A C T G A T G C A G T C C G T A C G T A A C T G
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AGGAGGCGCCAAG
------TGCCAA-
 C G T A A C T G A C T G G T C A A C T G A C T G A T G C A C T G A T G C A G T C C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AGGAGGCGCCAAG
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G G T C A A C T G A C T G A T G C A C T G A T G C A G T C C G T A C G T A A C T G
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.56
Offset:-8
Orientation:forward strand
Alignment:--------AGGAGGCGCCAAG
TGGCCACCAGGGGGCGCTA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G G T C A A C T G A C T G A T G C A C T G A T G C A G T C C G T A C G T A A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGGAGGCGCCAAG-
----GGCGGGAAAH
 C G T A A C T G A C T G G T C A A C T G A C T G A T G C A C T G A T G C A G T C C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T