Information for 5-AAAATBGCGG (Motif 6)

G C T A G T C A G T C A T G C A A C G T A C T G A C T G G T A C A T C G A C T G
Reverse Opposite:
G T A C A T G C A C T G A G T C T G A C G T C A A C G T C A G T C A G T C G A T
p-value:1e-14
log p-value:-3.441e+01
Information Content per bp:1.697
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif5.84%
Number of Background Sequences with motif720.4
Percentage of Background Sequences with motif1.64%
Average Position of motif in Targets50.0 +/- 27.1bp
Average Position of motif in Background50.6 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-AAAATBGCGG-
CAAGATGGCGGC
 A C G T G C T A G T C A G T C A T G C A A C G T A C T G A C T G G T A C A T C G A C T G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:AAAATBGCGG--
-TAATGGCGGNC
 G C T A G T C A G T C A T G C A A C G T A C T G A C T G G T A C A T C G A C T G A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-AAAATBGCGG-
CAAGATGGCGGC
 A C G T G C T A G T C A G T C A T G C A A C G T A C T G A C T G G T A C A T C G A C T G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AAAATBGCGG------
NAGANTGGCGGGGNGNA
 A C G T G C T A G T C A G T C A T G C A A C G T A C T G A C T G G T A C A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AAAATBGCGG---
----TTGCGGTTT
 G C T A G T C A G T C A T G C A A C G T A C T G A C T G G T A C A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AAAATBGCGG---
---TTTGCGGTTT
 G C T A G T C A G T C A T G C A A C G T A C T G A C T G G T A C A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

E2F3/MA0469.2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAAATBGCGG-------
AAAAATGGCGCCATTTTT
 A C G T G C T A G T C A G T C A T G C A A C G T A C T G A C T G G T A C A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

E2F2/MA0864.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAAATBGCGG------
AAAATGGCGCCATTTT
 G C T A G T C A G T C A T G C A A C G T A C T G A C T G G T A C A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AAAATBGCGG-----
----GGGCGGGAAGG
 G C T A G T C A G T C A T G C A A C G T A C T G A C T G G T A C A T C G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AAAATBGCGG---
---CWGGCGGGAA
 G C T A G T C A G T C A T G C A A C G T A C T G A C T G G T A C A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A