Information for 2-VGCCCCGCCCCCT (Motif 2)

T C G A C T A G A G T C A G T C G T A C A G T C C A T G A G T C A G T C A G T C G T A C G A T C A G C T
Reverse Opposite:
T C G A C T A G A C T G A C T G A C T G A C T G G T A C A C T G A C T G C T A G T C A G G A T C A G C T
p-value:1e-20
log p-value:-4.684e+01
Information Content per bp:1.723
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif8.34%
Number of Background Sequences with motif1063.9
Percentage of Background Sequences with motif2.42%
Average Position of motif in Targets48.2 +/- 23.7bp
Average Position of motif in Background47.4 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:forward strand
Alignment:VGCCCCGCCCCCT
GGCCCCGCCCCC-
 T C G A C T A G A G T C A G T C G T A C A G T C C A T G A G T C A G T C A G T C G T A C G A T C A G C T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-VGCCCCGCCCCCT
NAGCCCCGCCCCCN
 A C G T T C G A C T A G A G T C A G T C G T A C A G T C C A T G A G T C A G T C A G T C G T A C G A T C A G C T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:VGCCCCGCCCCCT
-GCCMCGCCCMCY
 T C G A C T A G A G T C A G T C G T A C A G T C C A T G A G T C A G T C A G T C G T A C G A T C A G C T
A C G T T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.94
Offset:1
Orientation:forward strand
Alignment:VGCCCCGCCCCCT
-GCCCCGCCCCC-
 T C G A C T A G A G T C A G T C G T A C A G T C C A T G A G T C A G T C A G T C G T A C G A T C A G C T
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.93
Offset:1
Orientation:forward strand
Alignment:VGCCCCGCCCCCT---
-GCCCCGCCCCCTCCC
 T C G A C T A G A G T C A G T C G T A C A G T C C A T G A G T C A G T C A G T C G T A C G A T C A G C T A C G T A C G T A C G T
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

KLF16/MA0741.1/Jaspar

Match Rank:6
Score:0.92
Offset:1
Orientation:forward strand
Alignment:VGCCCCGCCCCCT
-GCCACGCCCCC-
 T C G A C T A G A G T C A G T C G T A C A G T C C A T G A G T C A G T C A G T C G T A C G A T C A G C T
A C G T T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--VGCCCCGCCCCCT-
TCGACCCCGCCCCTAT
 A C G T A C G T T C G A C T A G A G T C A G T C G T A C A G T C C A T G A G T C A G T C A G T C G T A C G A T C A G C T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.90
Offset:1
Orientation:forward strand
Alignment:VGCCCCGCCCCCT
-GCCCCGCCCC--
 T C G A C T A G A G T C A G T C G T A C A G T C C A T G A G T C A G T C A G T C G T A C G A T C A G C T
A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--VGCCCCGCCCCCT--
TAAGCCACGCCCCCTTT
 A C G T A C G T T C G A C T A G A G T C A G T C G T A C A G T C C A T G A G T C A G T C A G T C G T A C G A T C A G C T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.89
Offset:0
Orientation:forward strand
Alignment:VGCCCCGCCCCCT----
GGTCCCGCCCCCTTCTC
 T C G A C T A G A G T C A G T C G T A C A G T C C A T G A G T C A G T C A G T C G T A C G A T C A G C T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C