Information for 10-KGGSACKCCCCTCTGG (Motif 16)

A C T G A C T G A C T G A T C G G T C A A G T C A C G T A T G C G T A C A G T C A G T C A C G T A T G C A C G T A C T G C T A G
Reverse Opposite:
A G T C A G T C T G C A A T C G C G T A A C T G C T A G A C T G A T C G G T C A A C T G A C G T A T G C A G T C G T A C G T A C
p-value:1e-9
log p-value:-2.302e+01
Information Content per bp:1.817
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.0 +/- 26.8bp
Average Position of motif in Background26.9 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB1/MA0105.4/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-KGGSACKCCCCTCTGG
AGGGGATTCCCCT----
 A C G T A C T G A C T G A C T G A T C G G T C A A G T C A C G T A T G C G T A C A G T C A G T C A C G T A T G C A C G T A C T G C T A G
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-KGGSACKCCCCTCTGG
AGGGGATTCCCCT----
 A C G T A C T G A C T G A C T G A T C G G T C A A G T C A C G T A T G C G T A C A G T C A G T C A C G T A T G C A C G T A C T G C T A G
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-KGGSACKCCCCTCTGG
GGGGGAATCCCC-----
 A C G T A C T G A C T G A C T G A T C G G T C A A G T C A C G T A T G C G T A C A G T C A G T C A C G T A T G C A C G T A C T G C T A G
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:KGGSACKCCCCTCTGG----
-----NTCCCCTCAGGGANT
 A C T G A C T G A C T G A T C G G T C A A G T C A C G T A T G C G T A C A G T C A G T C A C G T A T G C A C G T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:KGGSACKCCCCTCTGG----
-----NTCGCCTCAGGCAAT
 A C T G A C T G A C T G A T C G G T C A A G T C A C G T A T G C G T A C A G T C A G T C A C G T A T G C A C G T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:5
Orientation:forward strand
Alignment:KGGSACKCCCCTCTGG-
-----ATGCCCTGAGGC
 A C T G A C T G A C T G A T C G G T C A A G T C A C G T A T G C G T A C A G T C A G T C A C G T A T G C A C G T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:KGGSACKCCCCTCTGG
GGGAAATCCCCN----
 A C T G A C T G A C T G A T C G G T C A A G T C A C G T A T G C G T A C A G T C A G T C A C G T A T G C A C G T A C T G C T A G
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-KGGSACKCCCCTCTGG-
ATGCCACGCCCCTTTTTG
 A C G T A C T G A C T G A C T G A T C G G T C A A G T C A C G T A T G C G T A C A G T C A G T C A C G T A T G C A C G T A C T G C T A G A C G T
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:KGGSACKCCCCTCTGG-
-----GTCCCCAGGGGA
 A C T G A C T G A C T G A T C G G T C A A G T C A C G T A T G C G T A C A G T C A G T C A C G T A T G C A C G T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:KGGSACKCCCCTCTGG---
-----NTGCCCTAGGGCAA
 A C T G A C T G A C T G A T C G G T C A A G T C A C G T A T G C G T A C A G T C A G T C A C G T A T G C A C G T A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A