Information for 4-CAGGRGCMCAGGGCCT (Motif 7)

A G T C T G C A A C T G T C A G C T G A C T A G A T G C G T A C A T G C C G T A A T C G T C A G A T C G A T G C A G T C A G C T
Reverse Opposite:
T C G A C T A G A T C G A T G C A G T C A T G C A C G T A T C G C A T G A T C G A G T C A G C T A G T C T G A C A C G T C T A G
p-value:1e-13
log p-value:-3.007e+01
Information Content per bp:1.662
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.83%
Number of Background Sequences with motif370.5
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets53.5 +/- 24.7bp
Average Position of motif in Background51.5 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAGGRGCMCAGGGCCT-
---GGGGCCGAGGCCTG
 A G T C T G C A A C T G T C A G C T G A C T A G A T G C G T A C A T G C C G T A A T C G T C A G A T C G A T G C A G T C A G C T A C G T
A C G T A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAGGRGCMCAGGGCCT
----AGGTCAAGGTCA
 A G T C T G C A A C T G T C A G C T G A C T A G A T G C G T A C A T G C C G T A A T C G T C A G A T C G A T G C A G T C A G C T
A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CAGGRGCMCAGGGCCT-
-----GGACACACCCCC
 A G T C T G C A A C T G T C A G C T G A C T A G A T G C G T A C A T G C C G T A A T C G T C A G A T C G A T G C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CAGGRGCMCAGGGCCT
------CACAGN----
 A G T C T G C A A C T G T C A G C T G A C T A G A T G C G T A C A T G C C G T A A T C G T C A G A T C G A T G C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CAGGRGCMCAGGGCCT----
-----GACCACGCCCTTATT
 A G T C T G C A A C T G T C A G C T G A C T A G A T G C G T A C A T G C C G T A A T C G T C A G A T C G A T G C A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAGGRGCMCAGGGCCT-
--AGAGTCCAAAGTCCA
 A G T C T G C A A C T G T C A G C T G A C T A G A T G C G T A C A T G C C G T A A T C G T C A G A T C G A T G C A G T C A G C T A C G T
A C G T A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAGGRGCMCAGGGCCT
-CCAGGAACAG-----
 A G T C T G C A A C T G T C A G C T G A C T A G A T G C G T A C A T G C C G T A A T C G T C A G A T C G A T G C A G T C A G C T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CAGGRGCMCAGGGCCT-
---NAGGTCANTGACCT
 A G T C T G C A A C T G T C A G C T G A C T A G A T G C G T A C A T G C C G T A A T C G T C A G A T C G A T G C A G T C A G C T A C G T
A C G T A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CAGGRGCMCAGGGCCT--
---AAGTTCAAGGTCAGC
 A G T C T G C A A C T G T C A G C T G A C T A G A T G C G T A C A T G C C G T A A T C G T C A G A T C G A T G C A G T C A G C T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CAGGRGCMCAGGGCCT-
-CANAGNNCAAAGTCCA
 A G T C T G C A A C T G T C A G C T G A C T A G A T G C G T A C A T G C C G T A A T C G T C A G A T C G A T G C A G T C A G C T A C G T
A C G T G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A